6 homologs were found in PanDaTox collection
for query gene Dret_0959 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_0959  hypothetical protein  100 
 
 
91 aa  178  2e-44  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.0000000000442218  decreased coverage  0.000000000265735 
 
 
-
 
NC_011883  Ddes_0329  transcriptional regulator, XRE family  47.54 
 
 
64 aa  55.1  0.0000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.808495  n/a   
 
 
-
 
NC_008146  Mmcs_4897  XRE family transcriptional regulator  32.79 
 
 
219 aa  43.1  0.001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4986  XRE family transcriptional regulator  32.79 
 
 
219 aa  43.1  0.001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5265  XRE family transcriptional regulator  32.79 
 
 
219 aa  43.1  0.001  Mycobacterium sp. JLS  Bacteria  normal  normal  0.223709 
 
 
-
 
NC_013235  Namu_2858  transcriptional regulator, XRE family  32.43 
 
 
215 aa  41.6  0.004  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000622832  normal  0.0374075 
 
 
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