17 homologs were found in PanDaTox collection
for query gene Dred_2059 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_2059  putative transcriptional regulator  100 
 
 
390 aa  800    Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00686529  n/a   
 
 
-
 
NC_009712  Mboo_0830  putative transcriptional regulator  31.49 
 
 
478 aa  89.4  1e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.702449 
 
 
-
 
NC_008942  Mlab_0527  hypothetical protein  31.49 
 
 
429 aa  81.6  0.00000000000002  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.743194 
 
 
-
 
NC_010644  Emin_0557  putative transcriptional regulator  34.48 
 
 
360 aa  65.9  0.000000001  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1016  putative transcriptional regulator  28.23 
 
 
396 aa  65.5  0.000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007796  Mhun_2782  putative transcriptional regulator  32.23 
 
 
471 aa  54.7  0.000003  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.574947 
 
 
-
 
NC_002977  MCA1892  hypothetical protein  31.85 
 
 
382 aa  52.4  0.00001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1398  putative transcriptional regulator  32.69 
 
 
160 aa  51.2  0.00003  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.809172 
 
 
-
 
NC_007514  Cag_1101  putative transcriptional regulator  31.01 
 
 
402 aa  50.4  0.00005  Chlorobium chlorochromatii CaD3  Bacteria  decreased coverage  0.0000119822  n/a   
 
 
-
 
NC_010803  Clim_2462  putative transcriptional regulator  29.13 
 
 
480 aa  50.4  0.00005  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1271  putative transcriptional regulator  30.89 
 
 
218 aa  49.7  0.00009  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1706  putative transcriptional regulator  30.08 
 
 
480 aa  49.7  0.00009  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.383518  n/a   
 
 
-
 
NC_007413  Ava_2864  transcriptional regulator  28.19 
 
 
319 aa  47.4  0.0004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1753  putative transcriptional regulator  30.91 
 
 
485 aa  47.4  0.0005  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2313  putative transcriptional regulator  28.02 
 
 
417 aa  46.2  0.001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.584099  normal  0.468663 
 
 
-
 
NC_009051  Memar_0667  putative transcriptional regulator  26.77 
 
 
334 aa  45.8  0.001  Methanoculleus marisnigri JR1  Archaea  normal  0.15929  n/a   
 
 
-
 
NC_011830  Dhaf_4703  putative transcriptional regulator  38.96 
 
 
433 aa  45.1  0.002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
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