13 homologs were found in PanDaTox collection
for query gene Dred_1561 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_1561  cupin 2 domain-containing protein  100 
 
 
105 aa  217  3.9999999999999997e-56  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0537861  n/a   
 
 
-
 
NC_009718  Fnod_1325  cupin 2 domain-containing protein  28.75 
 
 
175 aa  45.8  0.0002  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3281  mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase  32.31 
 
 
476 aa  44.3  0.0005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5086  putative transcriptional regulator, XRE family  26.47 
 
 
192 aa  43.9  0.0007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1550  GCN5-related N-acetyltransferase  28.92 
 
 
286 aa  43.1  0.001  Methanospirillum hungatei JF-1  Archaea  normal  0.784988  normal  0.207791 
 
 
-
 
NC_008009  Acid345_1539  MerR family transcriptional regulator  30.36 
 
 
292 aa  43.1  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0172454  normal  0.655759 
 
 
-
 
NC_009486  Tpet_0275  cupin 2 domain-containing protein  25.32 
 
 
188 aa  43.1  0.001  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.00000000353927  n/a   
 
 
-
 
NC_010483  TRQ2_0273  XRE family transcriptional regulator  25.32 
 
 
176 aa  43.1  0.001  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0000144131  n/a   
 
 
-
 
NC_013743  Htur_0303  Cupin 2 conserved barrel domain protein  34.85 
 
 
121 aa  42.4  0.002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009012  Cthe_0751  XRE family transcriptional regulator  28.57 
 
 
179 aa  42  0.003  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000000101746  n/a   
 
 
-
 
NC_009483  Gura_0623  cupin 2 domain-containing protein  34.57 
 
 
148 aa  41.2  0.004  Geobacter uraniireducens Rf4  Bacteria  normal  0.339889  n/a   
 
 
-
 
NC_009511  Swit_1720  cupin 2 domain-containing protein  36 
 
 
94 aa  40.4  0.008  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3618  Cupin 2 conserved barrel domain protein  31.58 
 
 
153 aa  40  0.01  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.471134  n/a   
 
 
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