35 homologs were found in PanDaTox collection
for query gene Dred_1196 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002936  DET1098  virulence-associated protein E, putative  47.74 
 
 
789 aa  734    Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0384  virulence-associated protein E  52.41 
 
 
788 aa  858    Bacillus cereus ATCC 10987  Bacteria  normal  0.469306  n/a   
 
 
-
 
NC_011898  Ccel_2850  virulence-associated E family protein  52.53 
 
 
788 aa  859    Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000089982  n/a   
 
 
-
 
NC_009253  Dred_1196  virulence-associated E family protein  100 
 
 
818 aa  1695    Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1053  virulence-associated E family protein  48.39 
 
 
815 aa  759    Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.957725  n/a   
 
 
-
 
NC_009632  SaurJH1_1072  virulence-associated E family protein  48.39 
 
 
815 aa  759    Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1237  virulence-associated E family protein  51.26 
 
 
781 aa  830    Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000496901  n/a   
 
 
-
 
NC_011898  Ccel_3057  virulence-associated E family protein  42.18 
 
 
789 aa  622  1e-177  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00197064  n/a   
 
 
-
 
NC_013517  Sterm_1413  virulence-associated E family protein  39.56 
 
 
806 aa  568  1e-160  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3418  DNA primase domain protein  40.06 
 
 
739 aa  238  3e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0205684  n/a   
 
 
-
 
NC_009439  Pmen_3978  virulence-associated E family protein  42.26 
 
 
744 aa  235  3e-60  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00795636  normal  0.108518 
 
 
-
 
NC_002947  PP_3038  TraC domain-containing protein  38.89 
 
 
736 aa  220  6e-56  Pseudomonas putida KT2440  Bacteria  normal  normal  0.35161 
 
 
-
 
NC_007964  Nham_2155  virulence-associated E  42.58 
 
 
695 aa  201  3e-50  Nitrobacter hamburgensis X14  Bacteria  decreased coverage  0.00489763  n/a   
 
 
-
 
NC_011894  Mnod_1984  virulence-associated E family protein  34.67 
 
 
509 aa  195  3e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1880  virulence-associated E family protein  37.06 
 
 
835 aa  187  5e-46  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.00331522  n/a   
 
 
-
 
NC_011666  Msil_3095  virulence-associated E family protein  34.44 
 
 
413 aa  181  4e-44  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010577  XfasM23_1690  virulence-associated E family protein  36.08 
 
 
489 aa  169  2e-40  Xylella fastidiosa M23  Bacteria  normal  0.879464  n/a   
 
 
-
 
NC_009485  BBta_4941  hypothetical protein  41.23 
 
 
736 aa  169  2.9999999999999998e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.670147  normal 
 
 
-
 
NC_010681  Bphyt_1166  virulence-associated E family protein  33.84 
 
 
896 aa  162  2e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.67711 
 
 
-
 
NC_008752  Aave_1612  virulence-associated E family protein  35.87 
 
 
892 aa  161  4e-38  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.631807 
 
 
-
 
NC_007413  Ava_2569  virulence-associated E  37.07 
 
 
697 aa  142  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00313413  normal 
 
 
-
 
NC_007510  Bcep18194_A5640  virulence-associated E family protein  34.53 
 
 
761 aa  129  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  unclonable  0.00000000885028  normal 
 
 
 
NC_007413  Ava_3094  virulence-associated E  35.27 
 
 
662 aa  128  4.0000000000000003e-28  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000820429  normal  0.712426 
 
 
-
 
NC_008309  HS_0427  virulence-associated protein E  26.89 
 
 
476 aa  121  3.9999999999999996e-26  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0144  virulence-associated E family protein  33.33 
 
 
812 aa  121  4.9999999999999996e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0856396 
 
 
-
 
NC_007513  Syncc9902_1431  P-loop ATPase and inactivated derivatives-like  32.31 
 
 
400 aa  106  1e-21  Synechococcus sp. CC9902  Bacteria  normal  0.150716  n/a   
 
 
-
 
NC_010465  YPK_1212  virulence-associated E family protein  24.83 
 
 
725 aa  97.4  9e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0404  P-loop ATPase and inactivated derivatives-like protein  30.34 
 
 
431 aa  95.1  5e-18  Psychromonas ingrahamii 37  Bacteria  normal  0.233969  normal  0.98615 
 
 
-
 
NC_011071  Smal_0903  virulence-associated E family protein  28.81 
 
 
778 aa  94.7  6e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3284  P-loop ATPase and inactivated derivatives-like protein  31.67 
 
 
748 aa  77  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.832553  normal  0.553227 
 
 
-
 
NC_013730  Slin_5333  P-loop ATPase and inactivated derivatives-like protein  30.05 
 
 
749 aa  72  0.00000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.300834 
 
 
-
 
NC_007516  Syncc9605_0933  hypothetical protein  35 
 
 
218 aa  66.6  0.000000002  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2797  P4 family phage/plasmid primase  30.94 
 
 
782 aa  57  0.000001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0544  hypothetical protein  28.78 
 
 
543 aa  55.5  0.000005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  hitchhiker  0.000201357  normal  0.0617136 
 
 
-
 
NC_007973  Rmet_2662  Phage/plasmid primase P4-like protein  31.3 
 
 
632 aa  54.7  0.000007  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>