More than 300 homologs were found in PanDaTox collection
for query gene Dred_0275 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
CP001509  ECD_00037  carbamoyl-phosphate synthase large subunit  49.39 
 
 		 1073 aa  1003    Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_3566  carbamoyl-phosphate synthase, large subunit  49.39 
 
 		 1073 aa  1003    Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1202  carbamoyl-phosphate synthase, large subunit  57.64 
 
 		 1089 aa  1225    Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1276  carbamoyl-phosphate synthase, large subunit  51.26 
 
 		 1081 aa  1075    Geobacter sulfurreducens PCA  Bacteria  normal  0.104945  n/a   
 
 
-
 
NC_002947  PP_4723  carbamoyl phosphate synthase large subunit  48.58 
 
 		 1073 aa  1021    Pseudomonas putida KT2440  Bacteria  normal  1  hitchhiker  0.00575089 
 
 
-
 
NC_002976  SERP0769  carbamoyl phosphate synthase large subunit  60.4 
 
 		 1057 aa  1315    Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA1852  carbamoyl-phosphate synthase, large subunit  50 
 
 		 1072 aa  1079    Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc1521  carbamoyl phosphate synthase large subunit  50.09 
 
 		 1081 aa  1024    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_3931  carbamoyl phosphate synthase large subunit  62.24 
 
 		 1072 aa  1350    Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3458  carbamoyl phosphate synthase large subunit  47.44 
 
 		 1071 aa  967    Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG1042  carbamoyl phosphate synthase large subunit  58.94 
 
 		 1060 aa  1271    Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_1142  carbamoyl phosphate synthase large subunit  48.62 
 
 		 1074 aa  998    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4501  carbamoyl-phosphate synthase, large subunit  49.91 
 
 		 1073 aa  1034    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS3737  carbamoyl phosphate synthase large subunit  62.24 
 
 		 1072 aa  1349    Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_3628  carbamoyl phosphate synthase large subunit  62.24 
 
 		 1072 aa  1347    Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK3645  carbamoyl phosphate synthase large subunit  62.05 
 
 		 1072 aa  1345    Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA0772  carbamoyl phosphate synthase large subunit  49.62 
 
 		 1084 aa  1011    Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp2678  carbamoyl-phosphate synthase large subunit  48.64 
 
 		 1067 aa  1011    Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2550  carbamoyl-phosphate synthase large subunit  48.64 
 
 		 1067 aa  1011    Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4191  carbamoyl phosphate synthase large subunit  49.72 
 
 		 1073 aa  1030    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.725714  normal  1 
 
 
-
 
NC_007204  Psyc_0814  carbamoyl-phosphate synthase large subunit  50.14 
 
 		 1084 aa  1046    Psychrobacter arcticus 273-4  Bacteria  normal  0.253705  normal  0.0427985 
 
 
-
 
NC_007298  Daro_0939  carbamoyl phosphate synthase large subunit  50.76 
 
 		 1068 aa  1032    Dechloromonas aromatica RCB  Bacteria  normal  0.245842  normal  1 
 
 
-
 
NC_007333  Tfu_1057  carbamoyl-phosphate synthase large subunit  49.14 
 
 		 1103 aa  1022    Thermobifida fusca YX  Bacteria  normal  0.614826  n/a   
 
 
-
 
NC_007335  PMN2A_0226  carbamoyl phosphate synthase large subunit  47.7 
 
 		 1102 aa  977    Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A2175  carbamoyl phosphate synthase large subunit  49.91 
 
 		 1082 aa  1017    Ralstonia eutropha JMP134  Bacteria  normal  0.321083  n/a   
 
 
-
 
NC_007354  Ecaj_0635  carbamoyl phosphate synthase large subunit  47.28 
 
 		 1076 aa  959    Ehrlichia canis str. Jake  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A2374  carbamoyl phosphate synthase large subunit  54.06 
 
 		 1071 aa  1142    Methanosarcina barkeri str. Fusaro  Archaea  normal  0.128175  normal  0.572238 
 
 
-
 
NC_007404  Tbd_1128  carbamoyl-phosphate synthase large subunit  49.44 
 
 		 1068 aa  1046    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_1893  carbamoyl phosphate synthase large subunit  48.9 
 
 		 1097 aa  1025    Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.457655 
 
 
-
 
NC_007434  BURPS1710b_1610  carbamoyl phosphate synthase large subunit  49.62 
 
 		 1084 aa  1011    Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_2572  carbamoyl-phosphate synthase, large subunit, glutamine-dependent  50.28 
 
 		 1073 aa  1065    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0164695  n/a   
 
 
-
 
NC_007492  Pfl01_0767  carbamoyl phosphate synthase large subunit  49.43 
 
 		 1073 aa  1026    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.256868  normal  0.1584 
 
 
-
 
NC_007498  Pcar_1612  carbamoyl-phosphate synthase large subunit  51.23 
 
 		 1084 aa  1021    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000225246  n/a   
 
 
-
 
NC_007510  Bcep18194_A4434  carbamoyl phosphate synthase large subunit  49.91 
 
 		 1084 aa  1018    Burkholderia sp. 383  Bacteria  normal  0.901891  normal  1 
 
 
-
 
NC_007513  Syncc9902_0836  carbamoyl phosphate synthase large subunit  48.46 
 
 		 1106 aa  999    Synechococcus sp. CC9902  Bacteria  normal  1  n/a   
 
 
-
 
NC_007516  Syncc9605_1819  carbamoyl phosphate synthase large subunit  47.74 
 
 		 1107 aa  992    Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_1774  carbamoyl-phosphate synthase large subunit  51.12 
 
 		 1081 aa  1070    Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000157385  normal  0.0854041 
 
 
-
 
NC_007519  Dde_0333  carbamoyl-phosphate synthase large subunit  49.16 
 
 		 1087 aa  1020    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.639877  n/a   
 
 
-
 
NC_007520  Tcr_0879  carbamoyl-phosphate synthase, large subunit  49.49 
 
 		 1070 aa  1008    Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4025  carbamoyl phosphate synthase large subunit  62.24 
 
 		 1072 aa  1349    Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007577  PMT9312_0975  carbamoyl-phosphate synthase large subunit  48.28 
 
 		 1098 aa  995    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_0711  carbamoyl phosphate synthase large subunit  48.87 
 
 		 1097 aa  1031    Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A0479  carbamoyl-phosphate synthase, large subunit  51.74 
 
 		 1075 aa  1041    Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2886  carbamoyl phosphate synthase large subunit  49.35 
 
 		 1082 aa  1035    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.827795  n/a   
 
 
-
 
NC_007644  Moth_0882  carbamoyl-phosphate synthase large subunit  63.01 
 
 		 1063 aa  1339    Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007651  BTH_I2781  carbamoyl phosphate synthase large subunit  49.81 
 
 		 1084 aa  1016    Burkholderia thailandensis E264  Bacteria  normal  0.0855395  n/a   
 
 
-
 
NC_007760  Adeh_1729  carbamoyl phosphate synthase large subunit  48.69 
 
 		 1077 aa  1010    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3198  carbamoyl phosphate synthase large subunit  47.31 
 
 		 1130 aa  975    Frankia sp. CcI3  Bacteria  decreased coverage  0.00397433  normal  1 
 
 
-
 
NC_007796  Mhun_0115  carbamoyl phosphate synthase large subunit  52.67 
 
 		 1056 aa  1037    Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_1063  carbamoyl phosphate synthase large subunit  46.55 
 
 		 1110 aa  959    Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_2006  carbamoyl-phosphate synthase, large subunit  50.14 
 
 		 1098 aa  993    Rhodoferax ferrireducens T118  Bacteria  normal  0.488825  n/a   
 
 
-
 
NC_007912  Sde_2728  carbamoyl phosphate synthase large subunit  48.91 
 
 		 1077 aa  1017    Saccharophagus degradans 2-40  Bacteria  normal  0.523784  normal  1 
 
 
-
 
NC_007947  Mfla_0779  carbamoyl-phosphate synthase large subunit  50.42 
 
 		 1068 aa  1070    Methylobacillus flagellatus KT  Bacteria  normal  0.0332696  hitchhiker  0.000231672 
 
 
-
 
NC_007948  Bpro_2678  carbamoyl-phosphate synthase large subunit  52.18 
 
 		 1076 aa  986    Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A1257  carbamoyl phosphate synthase large subunit  49.72 
 
 		 1084 aa  1004    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_0996  carbamoyl phosphate synthase large subunit  48.15 
 
 		 1075 aa  993    Shewanella denitrificans OS217  Bacteria  normal  0.846706  n/a   
 
 
-
 
NC_007955  Mbur_0872  carbamoyl phosphate synthase large subunit  52.58 
 
 		 1075 aa  1125    Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_007963  Csal_3085  carbamoyl-phosphate synthase large subunit  49.2 
 
 		 1076 aa  1027    Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_0829  carbamoyl-phosphate synthase, large subunit  50.05 
 
 		 1112 aa  1046    Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_2193  carbamoyl phosphate synthase large subunit  50.47 
 
 		 1082 aa  1021    Cupriavidus metallidurans CH34  Bacteria  normal  0.0442347  normal  0.129534 
 
 
-
 
NC_007984  BCI_0560  carbamoyl-phosphate synthase, large subunit  47.93 
 
 		 1079 aa  980    Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_2197  carbamoyl-phosphate synthase large subunit  50.96 
 
 		 1102 aa  1049    Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_2070  carbamoyl phosphate synthase large subunit  49.38 
 
 		 1029 aa  959    Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0632  carbamoyl phosphate synthase large subunit  46.3 
 
 		 1120 aa  961    Ruegeria sp. TM1040  Bacteria  normal  0.298922  normal  0.175677 
 
 
-
 
NC_008048  Sala_0985  carbamoyl phosphate synthase large subunit  48.12 
 
 		 1106 aa  962    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.557617  normal  1 
 
 
-
 
NC_008060  Bcen_0811  carbamoyl phosphate synthase large subunit  50 
 
 		 1084 aa  1019    Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_2367  carbamoyl phosphate synthase large subunit  46.99 
 
 		 1112 aa  964    Mycobacterium sp. MCS  Bacteria  normal  0.817973  n/a   
 
 
-
 
NC_008148  Rxyl_1477  carbamoyl-phosphate synthase large subunit  52.02 
 
 		 1054 aa  1061    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.438417  n/a   
 
 
-
 
NC_008228  Patl_2214  carbamoyl phosphate synthase large subunit  48.68 
 
 		 1072 aa  999    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.173726  n/a   
 
 
-
 
NC_008261  CPF_2897  carbamoyl phosphate synthase large subunit  58.15 
 
 		 1067 aa  1232    Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_2576  carbamoyl phosphate synthase large subunit  57.96 
 
 		 1067 aa  1229    Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_2877  carbamoyl phosphate synthase large subunit  51.57 
 
 		 1076 aa  1040    Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.1435 
 
 
-
 
NC_008321  Shewmr4_0966  carbamoyl phosphate synthase large subunit  48.58 
 
 		 1074 aa  993    Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_1004  carbamoyl phosphate synthase large subunit  48.58 
 
 		 1074 aa  993    Shewanella sp. MR-7  Bacteria  normal  0.777466  normal  0.846919 
 
 
-
 
NC_008340  Mlg_1981  carbamoyl-phosphate synthase large subunit  50.52 
 
 		 1078 aa  1050    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  decreased coverage  0.00635498 
 
 
-
 
NC_008345  Sfri_0976  carbamoyl phosphate synthase large subunit  48.53 
 
 		 1073 aa  1002    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_1281  carbamoyl-phosphate synthase, large subunit  59.81 
 
 		 1074 aa  1291    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2138  carbamoyl phosphate synthase large subunit  47.6 
 
 		 1085 aa  993    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.0923584 
 
 
-
 
NC_008390  Bamb_1169  carbamoyl phosphate synthase large subunit  50.09 
 
 		 1084 aa  1008    Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_62910  carbamoyl phosphate synthase large subunit  48.86 
 
 		 1073 aa  1030    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008527  LACR_1498  carbamoyl phosphate synthase large subunit  60.51 
 
 		 1064 aa  1248    Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_008528  OEOE_0261  carbamoyl-phosphate synthase large subunit  57.81 
 
 		 1064 aa  1228    Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008530  LGAS_1087  carbamoyl phosphate synthase large subunit  57.02 
 
 		 1062 aa  1235    Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008531  LEUM_1207  carbamoyl-phosphate synthase large subunit  58.63 
 
 		 1059 aa  1244    Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_0559  carbamoyl phosphate synthase large subunit  61.31 
 
 		 1059 aa  1295    Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_2262  carbamoyl phosphate synthase large subunit  47.84 
 
 		 1099 aa  989    Arthrobacter sp. FB24  Bacteria  normal  0.133094  n/a   
 
 
-
 
NC_008542  Bcen2424_1292  carbamoyl phosphate synthase large subunit  50 
 
 		 1084 aa  1019    Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_008553  Mthe_1254  carbamoyl phosphate synthase large subunit  55.26 
 
 		 1074 aa  1164    Methanosaeta thermophila PT  Archaea  normal  0.179154  n/a   
 
 
-
 
NC_008554  Sfum_0008  carbamoyl phosphate synthase large subunit  52.3 
 
 		 1080 aa  1082    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.196188  normal  1 
 
 
-
 
NC_008576  Mmc1_3018  carbamoyl-phosphate synthase large subunit  50.33 
 
 		 1074 aa  1034    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_0968  carbamoyl phosphate synthase large subunit  48.58 
 
 		 1074 aa  994    Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1298  carbamoyl-phosphate synthase large subunit  48.47 
 
 		 1093 aa  1001    Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.0243124 
 
 
-
 
NC_008609  Ppro_2524  carbamoyl-phosphate synthase, large subunit  49.91 
 
 		 1078 aa  1045    Pelobacter propionicus DSM 2379  Bacteria  normal  0.0237548  n/a   
 
 
-
 
NC_008686  Pden_1879  carbamoyl phosphate synthase large subunit  48.21 
 
 		 1110 aa  989    Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.99136 
 
 
-
 
NC_008699  Noca_2431  carbamoyl-phosphate synthase large subunit  47.9 
 
 		 1143 aa  979    Nocardioides sp. JS614  Bacteria  normal  0.133132  n/a   
 
 
-
 
NC_008700  Sama_2503  carbamoyl phosphate synthase large subunit  48.19 
 
 		 1076 aa  1002    Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_2414  carbamoyl phosphate synthase large subunit  46.99 
 
 		 1112 aa  964    Mycobacterium sp. KMS  Bacteria  normal  0.271398  normal  0.318582 
 
 
-
 
NC_008740  Maqu_3358  carbamoyl-phosphate synthase, large subunit  49.28 
 
 		 1072 aa  1020    Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_2806  carbamoyl-phosphate synthase, large subunit  50.28 
 
 		 1077 aa  1049    Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_2611  carbamoyl-phosphate synthase large subunit  50.7 
 
 		 1056 aa  989    Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.994048 
 
 
-
 
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