More than 300 homologs were found in PanDaTox collection
for query gene Dole_2207 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_2207  crossover junction endodeoxyribonuclease  100 
 
 
161 aa  323  4.0000000000000003e-88  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00329644  n/a   
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  34.44 
 
 
160 aa  102  2e-21  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_013739  Cwoe_3179  crossover junction endodeoxyribonuclease RuvC  38.51 
 
 
164 aa  97.8  5e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal 
 
 
-
 
NC_013730  Slin_2240  crossover junction endodeoxyribonuclease RuvC  35.81 
 
 
182 aa  96.7  1e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  35.81 
 
 
179 aa  96.7  1e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  33.11 
 
 
163 aa  95.9  2e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  34.46 
 
 
167 aa  94  8e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_008817  P9515_11451  Holliday junction resolvase  33.33 
 
 
157 aa  92.8  2e-18  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.447359  n/a   
 
 
-
 
NC_009712  Mboo_0111  Holliday junction resolvase  35.57 
 
 
156 aa  91.7  3e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_008346  Swol_1433  hypothetical protein  38.12 
 
 
172 aa  90.5  9e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.000000864662  n/a   
 
 
-
 
NC_007796  Mhun_0890  Holliday junction resolvase  32.89 
 
 
164 aa  89.7  1e-17  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0795494 
 
 
-
 
NC_013205  Aaci_2115  crossover junction endodeoxyribonuclease RuvC  35.61 
 
 
184 aa  89.4  2e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.805464  n/a   
 
 
-
 
NC_008816  A9601_11591  Holliday junction resolvase  33.99 
 
 
157 aa  89.4  2e-17  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  33.11 
 
 
182 aa  89  2e-17  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_008554  Sfum_0995  crossover junction endodeoxyribonuclease RuvC  36.42 
 
 
183 aa  89.4  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.410626  normal 
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  31.08 
 
 
161 aa  88.6  3e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  32.68 
 
 
164 aa  87.8  6e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  30.41 
 
 
165 aa  86.7  1e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  34.67 
 
 
164 aa  86.7  1e-16  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_007577  PMT9312_1065  Holliday junction resolvase  32.03 
 
 
157 aa  86.7  1e-16  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  28 
 
 
164 aa  84.7  4e-16  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1864  crossover junction endodeoxyribonuclease RuvC  38.3 
 
 
178 aa  85.1  4e-16  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.000897484  n/a   
 
 
-
 
NC_002977  MCA1221  crossover junction endodeoxyribonuclease RuvC  35.4 
 
 
165 aa  84.7  4e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  0.69785  n/a   
 
 
-
 
NC_009091  P9301_11601  Holliday junction resolvase  32.03 
 
 
157 aa  84.3  6e-16  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  34.44 
 
 
173 aa  84.3  6e-16  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  33.33 
 
 
164 aa  84.3  7e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  33.78 
 
 
159 aa  83.2  0.000000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_011661  Dtur_1614  Holliday junction resolvase  38.93 
 
 
158 aa  82.4  0.000000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0497  crossover junction endodeoxyribonuclease RuvC  32.68 
 
 
187 aa  82.8  0.000000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.655461  normal 
 
 
-
 
NC_009616  Tmel_1038  Holliday junction resolvase  34.53 
 
 
157 aa  82.8  0.000000000000002  Thermosipho melanesiensis BI429  Bacteria  normal  0.0318292  n/a   
 
 
-
 
NC_011138  MADE_01729  Holliday junction resolvase  36.03 
 
 
146 aa  82.4  0.000000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000012224  n/a   
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  29.75 
 
 
162 aa  82  0.000000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_07030  crossover junction endodeoxyribonuclease RuvC  33.78 
 
 
165 aa  81.6  0.000000000000004  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000194314  normal  0.296999 
 
 
-
 
NC_008228  Patl_2946  Holliday junction resolvase  37.59 
 
 
173 aa  81.3  0.000000000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.185202  n/a   
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  34.9 
 
 
165 aa  80.9  0.000000000000006  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_013421  Pecwa_2102  Holliday junction resolvase  34.85 
 
 
173 aa  80.9  0.000000000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1651  crossover junction endodeoxyribonuclease RuvC  31.08 
 
 
157 aa  80.5  0.000000000000008  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1818  Holliday junction resolvase  34.85 
 
 
173 aa  80.5  0.000000000000008  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.311556  n/a   
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  32 
 
 
171 aa  80.5  0.000000000000008  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_008639  Cpha266_0539  crossover junction endodeoxyribonuclease RuvC  32.68 
 
 
187 aa  80.5  0.000000000000008  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_12860  crossover junction endodeoxyribonuclease RuvC  33.09 
 
 
174 aa  80.5  0.000000000000009  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl1250  Holliday junction resolvase  34.09 
 
 
174 aa  80.1  0.00000000000001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_3856  Holliday junction resolvase  33.33 
 
 
183 aa  80.5  0.00000000000001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_51800  Holliday junction resolvase  34.19 
 
 
174 aa  80.1  0.00000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000486306 
 
 
-
 
NC_009976  P9211_11371  Holliday junction resolvase  33.33 
 
 
158 aa  80.1  0.00000000000001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.925664 
 
 
-
 
NC_013061  Phep_0400  crossover junction endodeoxyribonuclease RuvC  30.41 
 
 
187 aa  79  0.00000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.253093 
 
 
-
 
NC_010682  Rpic_0379  Holliday junction resolvase  32.67 
 
 
181 aa  79.7  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1217  crossover junction endodeoxyribonuclease RuvC  29.38 
 
 
164 aa  79.7  0.00000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.331391  n/a   
 
 
-
 
NC_013522  Taci_0924  crossover junction endodeoxyribonuclease RuvC  34 
 
 
165 aa  79  0.00000000000003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.250191  n/a   
 
 
-
 
NC_006368  lpp1250  Holliday junction resolvase  33.33 
 
 
174 aa  79  0.00000000000003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010551  BamMC406_0609  Holliday junction resolvase  34.67 
 
 
183 aa  79  0.00000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.385188  normal  0.439523 
 
 
-
 
NC_009718  Fnod_1720  crossover junction endodeoxyribonuclease RuvC  31.3 
 
 
166 aa  79  0.00000000000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.029168  n/a   
 
 
-
 
NC_008390  Bamb_0583  Holliday junction resolvase  34.67 
 
 
183 aa  79  0.00000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0503  Holliday junction resolvase  32.45 
 
 
181 aa  78.6  0.00000000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.46163 
 
 
-
 
NC_008309  HS_0509  Holliday junction resolvase  34.85 
 
 
189 aa  78.2  0.00000000000004  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  32.67 
 
 
180 aa  78.2  0.00000000000004  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_010644  Emin_1152  crossover junction endodeoxyribonuclease RuvC  33.33 
 
 
189 aa  78.2  0.00000000000004  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0918  Holliday junction resolvase  35.37 
 
 
157 aa  78.2  0.00000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0394  Holliday junction resolvase  33.11 
 
 
181 aa  78.2  0.00000000000005  Ralstonia pickettii 12D  Bacteria  normal  normal  0.638558 
 
 
-
 
NC_007510  Bcep18194_A3776  Holliday junction resolvase  34.67 
 
 
180 aa  78.2  0.00000000000005  Burkholderia sp. 383  Bacteria  normal  0.518042  normal 
 
 
-
 
NC_010508  Bcenmc03_0657  Holliday junction resolvase  34 
 
 
180 aa  77.8  0.00000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2778  Holliday junction resolvase  32.58 
 
 
173 aa  77.8  0.00000000000006  Serratia proteamaculans 568  Bacteria  normal  0.0426005  normal  0.0283844 
 
 
-
 
NC_008060  Bcen_0207  Holliday junction resolvase  34 
 
 
180 aa  77.8  0.00000000000006  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  32.3 
 
 
173 aa  77.8  0.00000000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_008542  Bcen2424_0690  Holliday junction resolvase  34 
 
 
180 aa  77.8  0.00000000000006  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0895  crossover junction endodeoxyribonuclease RuvC  30.94 
 
 
167 aa  77.4  0.00000000000007  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000302066  normal  0.153116 
 
 
-
 
NC_007651  BTH_I1249  Holliday junction resolvase  34 
 
 
180 aa  77.4  0.00000000000008  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  34.21 
 
 
173 aa  77  0.00000000000009  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_3618  crossover junction endodeoxyribonuclease RuvC  33.77 
 
 
166 aa  77  0.00000000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.1831  normal  0.457471 
 
 
-
 
NC_009080  BMA10247_2534  Holliday junction resolvase  33.77 
 
 
180 aa  76.6  0.0000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2355  Holliday junction resolvase  33.77 
 
 
180 aa  76.6  0.0000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3399  Holliday junction resolvase  33.77 
 
 
180 aa  76.6  0.0000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0115  Holliday junction resolvase  32.85 
 
 
163 aa  76.6  0.0000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.44178 
 
 
-
 
NC_007434  BURPS1710b_3405  Holliday junction resolvase  33.77 
 
 
180 aa  76.6  0.0000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  34.21 
 
 
173 aa  76.6  0.0000000000001  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  33.55 
 
 
173 aa  76.6  0.0000000000001  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_008321  Shewmr4_1900  Holliday junction resolvase  34.59 
 
 
173 aa  76.6  0.0000000000001  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000300533  hitchhiker  0.000114763 
 
 
-
 
NC_008322  Shewmr7_2078  Holliday junction resolvase  34.59 
 
 
173 aa  76.6  0.0000000000001  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000308371  hitchhiker  0.00162508 
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  31.08 
 
 
166 aa  77  0.0000000000001  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_009656  PSPA7_4543  Holliday junction resolvase  33.55 
 
 
174 aa  77  0.0000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2694  Holliday junction resolvase  33.33 
 
 
180 aa  77  0.0000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.218252  normal  0.976349 
 
 
-
 
NC_013132  Cpin_1243  crossover junction endodeoxyribonuclease RuvC  32.67 
 
 
202 aa  76.3  0.0000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  34 
 
 
161 aa  76.3  0.0000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0268  Holliday junction resolvase  33.77 
 
 
284 aa  75.9  0.0000000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3343  Holliday junction resolvase  34 
 
 
180 aa  76.3  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00888007 
 
 
-
 
NC_013204  Elen_0972  crossover junction endodeoxyribonuclease RuvC  31.65 
 
 
192 aa  75.9  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.00108753 
 
 
-
 
NC_009436  Ent638_2431  Holliday junction resolvase  32.58 
 
 
173 aa  75.9  0.0000000000002  Enterobacter sp. 638  Bacteria  normal  0.0114674  normal 
 
 
-
 
NC_010524  Lcho_0531  Holliday junction resolvase  34.19 
 
 
183 aa  75.9  0.0000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  33.11 
 
 
164 aa  75.5  0.0000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1130  Holliday junction resolvase  33.77 
 
 
275 aa  75.5  0.0000000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1937  Holliday junction resolvase  33.08 
 
 
173 aa  75.5  0.0000000000003  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00155576  n/a   
 
 
-
 
NC_004347  SO_2431  Holliday junction resolvase  33.83 
 
 
173 aa  75.5  0.0000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  33.55 
 
 
173 aa  75.1  0.0000000000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_007512  Plut_1642  crossover junction endodeoxyribonuclease RuvC  31.61 
 
 
191 aa  75.1  0.0000000000003  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  33.11 
 
 
164 aa  75.5  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_007951  Bxe_A0617  Holliday junction resolvase  34 
 
 
180 aa  75.5  0.0000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.481352 
 
 
-
 
NC_010831  Cphamn1_0543  crossover junction endodeoxyribonuclease RuvC  30.92 
 
 
186 aa  75.5  0.0000000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2554  Holliday junction resolvase  33.33 
 
 
180 aa  75.5  0.0000000000003  Burkholderia phymatum STM815  Bacteria  normal  0.250708  normal 
 
 
-
 
NC_014210  Ndas_0837  crossover junction endodeoxyribonuclease RuvC  34.04 
 
 
185 aa  75.1  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0698715  normal  0.0994154 
 
 
-
 
NC_010658  SbBS512_E1109  Holliday junction resolvase  33.33 
 
 
173 aa  75.1  0.0000000000004  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
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