19 homologs were found in PanDaTox collection
for query gene DhcVS_1503 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002936  DET1621  hypothetical protein  87.22 
 
 
446 aa  759    Dehalococcoides ethenogenes 195  Bacteria  normal  0.967511  n/a   
 
 
-
 
NC_013552  DhcVS_1503  cell wall/surface repeat protein  100 
 
 
446 aa  907    Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1367  cell wall/surface repeat-containing protein  73.09 
 
 
432 aa  669    Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0968  hypothetical protein  31.48 
 
 
456 aa  68.2  0.0000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1403  hypothetical protein  29.03 
 
 
509 aa  67  0.0000000007  Dehalococcoides ethenogenes 195  Bacteria  normal  0.0229989  n/a   
 
 
-
 
NC_009675  Anae109_1680  cell wall/surface repeat-containing protein  25.34 
 
 
1263 aa  65.9  0.000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.513356  normal 
 
 
-
 
NC_013132  Cpin_0079  cell wall/surface repeat protein  44.59 
 
 
750 aa  66.2  0.000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_1185  hypothetical protein  28.96 
 
 
509 aa  63.9  0.000000005  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00163792  n/a   
 
 
-
 
NC_009455  DehaBAV1_1212  hypothetical protein  29.68 
 
 
510 aa  61.6  0.00000003  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000290605  n/a   
 
 
-
 
NC_010814  Glov_1449  hypothetical protein  30 
 
 
1027 aa  58.5  0.0000002  Geobacter lovleyi SZ  Bacteria  normal  0.415976  n/a   
 
 
-
 
NC_009675  Anae109_3722  hypothetical protein  24.56 
 
 
1390 aa  53.5  0.000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.645287  normal 
 
 
-
 
NC_002939  GSU2715  fibronectin type III domain-containing protein  34.55 
 
 
864 aa  51.6  0.00003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3245  hypothetical protein  27.27 
 
 
537 aa  50.4  0.00006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2169  LamG domain-containing protein  28.29 
 
 
4357 aa  50.1  0.00007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2712  alpha-1,6-glucosidase, pullulanase-type  29.41 
 
 
2156 aa  48.5  0.0002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.971607  normal 
 
 
-
 
NC_008255  CHU_1978  N-acetylglucosamine-1-phosphate uridyltransferase  43.75 
 
 
797 aa  44.3  0.004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.752482 
 
 
-
 
NC_007912  Sde_3876  hypothetical protein  29.45 
 
 
947 aa  43.9  0.006  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.10473 
 
 
-
 
NC_009438  Sputcn32_3268  hypothetical protein  24 
 
 
425 aa  43.5  0.008  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1386  hypothetical protein  22.28 
 
 
966 aa  43.1  0.01  Rhodothermus marinus DSM 4252  Bacteria  unclonable  0.0000313408  n/a   
 
 
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