83 homologs were found in PanDaTox collection
for query gene Dhaf_3454 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011830  Dhaf_3454  2-hydroxyglutaryl-CoA dehydratase D-component  100 
 
 		 386 aa  784    Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0891  2-hydroxyglutaryl-CoA dehydratase D-component  30.06 
 
 		 373 aa  131  2.0000000000000002e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2774  2-hydroxyglutaryl-CoA dehydratase D-component  28.97 
 
 		 376 aa  130  3e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2769  2-hydroxyglutaryl-CoA dehydratase D-component  27.68 
 
 		 379 aa  125  1e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1101  2-hydroxyglutaryl-CoA dehydratase D-component  29.71 
 
 		 379 aa  123  6e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_1147  2-hydroxyglutaryl-CoA dehydratase D-component  25.89 
 
 		 393 aa  114  2.0000000000000002e-24  Methanosphaerula palustris E1-9c  Archaea  normal  0.132933  normal  1 
 
 
-
 
NC_013385  Adeg_1708  2-hydroxyglutaryl-CoA dehydratase D-component  28.65 
 
 		 322 aa  105  1e-21  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1007  2-hydroxyglutaryl-CoA dehydratase, D-component  27.12 
 
 		 349 aa  100  5e-20  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.0000000530359  hitchhiker  0.000167288 
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  25.28 
 
 		 373 aa  97.8  3e-19  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_013216  Dtox_0119  2-hydroxyglutaryl-CoA dehydratase D-component  26.26 
 
 		 424 aa  93.2  7e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000350126  normal  0.0170821 
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  26.69 
 
 		 372 aa  93.2  7e-18  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_014150  Bmur_0617  2-hydroxyglutaryl-CoA dehydratase D-component  24.16 
 
 		 384 aa  91.7  2e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_2024  2-hydroxyglutaryl-CoA dehydratase D-component  22.75 
 
 		 439 aa  91.3  2e-17  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_1686  2-hydroxyglutaryl-CoA dehydratase D-component  24.32 
 
 		 370 aa  92  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0274681  n/a   
 
 
-
 
NC_011883  Ddes_0545  2-hydroxyglutaryl-CoA dehydratase D-component  25.78 
 
 		 379 aa  91.3  3e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  24.15 
 
 		 373 aa  90.9  3e-17  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_013522  Taci_0254  2-hydroxyglutaryl-CoA dehydratase D-component  27.89 
 
 		 423 aa  90.5  4e-17  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  23.86 
 
 		 373 aa  90.5  4e-17  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  24.29 
 
 		 373 aa  90.1  6e-17  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_1311  2-hydroxyglutaryl-CoA dehydratase D-component  25.14 
 
 		 388 aa  90.1  6e-17  Methanosphaerula palustris E1-9c  Archaea  normal  0.522959  normal  1 
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  26.25 
 
 		 401 aa  90.1  6e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_002939  GSU2944  (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit, putative  25.78 
 
 		 431 aa  89.4  1e-16  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_0873  2-hydroxyglutaryl-CoA dehydratase, D-component  24.15 
 
 		 385 aa  87.4  4e-16  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2519  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  25.33 
 
 		 387 aa  87  5e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.321633  n/a   
 
 
-
 
NC_007644  Moth_1446  2-hydroxyglutaryl-CoA dehydratase, D-component  25.41 
 
 		 381 aa  87  5e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.629308  normal  0.054659 
 
 
-
 
NC_011004  Rpal_0724  benzoyl-CoA reductase, subunit C  23.4 
 
 		 394 aa  87  5e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.377082  n/a   
 
 
-
 
NC_009975  MmarC6_0607  2-hydroxyglutaryl-CoA dehydratase D-component  24.16 
 
 		 373 aa  86.3  8e-16  Methanococcus maripaludis C6  Archaea  normal  0.422107  n/a   
 
 
-
 
NC_011830  Dhaf_3912  2-hydroxyglutaryl-CoA dehydratase D-component  26.34 
 
 		 384 aa  85.9  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_16090  2-hydroxyglutaryl-CoA dehydratase D-component  24.64 
 
 		 355 aa  85.9  0.000000000000001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_1538  benzoyl-CoA reductase, subunit C  23.96 
 
 		 394 aa  85.5  0.000000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.130058  normal  1 
 
 
-
 
NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  26.59 
 
 		 426 aa  85.9  0.000000000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_1029  benzoyl-CoA reductase, subunit C  23.68 
 
 		 394 aa  85.1  0.000000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009802  CCC13826_1134  UDP-MurNac-pentapeptide presynthetase  23.88 
 
 		 385 aa  84.7  0.000000000000002  Campylobacter concisus 13826  Bacteria  normal  0.207036  n/a   
 
 
-
 
NC_011769  DvMF_0986  2-hydroxyglutaryl-CoA dehydratase D-component  23.94 
 
 		 379 aa  85.1  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.345407 
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  24.44 
 
 		 373 aa  84.3  0.000000000000003  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  23.88 
 
 		 373 aa  83.6  0.000000000000006  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
-
 
NC_013165  Shel_26180  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  24.66 
 
 		 384 aa  83.2  0.000000000000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_1927  2-hydroxyglutaryl-CoA dehydratase D-component  26.04 
 
 		 425 aa  82.8  0.00000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.756388  n/a   
 
 
-
 
NC_008554  Sfum_3256  2-hydroxyglutaryl-CoA dehydratase, D-component  25.28 
 
 		 423 aa  81.6  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_25330  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  26.17 
 
 		 390 aa  81.3  0.00000000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.8257 
 
 
-
 
NC_009634  Mevan_1623  2-hydroxyglutaryl-CoA dehydratase D-component  29.17 
 
 		 373 aa  80.9  0.00000000000004  Methanococcus vannielii SB  Archaea  decreased coverage  0.000208392  n/a   
 
 
-
 
NC_013517  Sterm_1694  2-hydroxyglutaryl-CoA dehydratase D-component  24.4 
 
 		 382 aa  80.1  0.00000000000006  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0930  2-hydroxyglutaryl-CoA dehydratase D-component  26.41 
 
 		 377 aa  79.7  0.00000000000007  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0187897  n/a   
 
 
-
 
NC_009712  Mboo_0866  2-hydroxyglutaryl-CoA dehydratase, D-component  25.4 
 
 		 383 aa  79.7  0.00000000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.327302  normal  1 
 
 
-
 
NC_008346  Swol_0412  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  23.46 
 
 		 424 aa  79  0.0000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2951  benzoyl-CoA reductase, subunit C  23.48 
 
 		 386 aa  79.3  0.0000000000001  Thauera sp. MZ1T  Bacteria  normal  0.689086  n/a   
 
 
-
 
NC_013204  Elen_1690  2-hydroxyglutaryl-CoA dehydratase D-component  25.55 
 
 		 424 aa  78.6  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.531982  normal  0.740952 
 
 
-
 
NC_013216  Dtox_2825  2-hydroxyglutaryl-CoA dehydratase D-component  25.29 
 
 		 368 aa  77.8  0.0000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011661  Dtur_1747  2-hydroxyglutaryl-CoA dehydratase D-component  22.48 
 
 		 339 aa  76.3  0.0000000000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  23.9 
 
 		 426 aa  76.3  0.0000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0427  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  26.22 
 
 		 382 aa  75.5  0.000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE0392  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  23.18 
 
 		 392 aa  75.5  0.000000000001  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_0091  2-hydroxyglutaryl-CoA dehydratase D-component  24.72 
 
 		 429 aa  74.7  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE0389  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  24.59 
 
 		 412 aa  75.5  0.000000000002  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_4937  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  25.92 
 
 		 383 aa  75.1  0.000000000002  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_4882  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  25.07 
 
 		 383 aa  73.9  0.000000000004  Escherichia coli SMS-3-5  Bacteria  normal  0.30993  normal  0.992487 
 
 
-
 
NC_009800  EcHS_A4563  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  25.07 
 
 		 383 aa  73.9  0.000000000005  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_1278  2-hydroxyglutaryl-CoA dehydratase, D-component  23.18 
 
 		 385 aa  73.6  0.000000000006  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_11360  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  25.68 
 
 		 426 aa  73.2  0.000000000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.390545  normal  0.8731 
 
 
-
 
NC_011353  ECH74115_5849  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  25.07 
 
 		 383 aa  72.4  0.00000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.981774 
 
 
-
 
NC_010718  Nther_0828  2-hydroxyglutaryl-CoA dehydratase D-component  23.2 
 
 		 393 aa  72.4  0.00000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.0000331904 
 
 
-
 
CP001637  EcDH1_3660  2-hydroxyglutaryl-CoA dehydratase D-component  25.07 
 
 		 383 aa  72.8  0.00000000001  Escherichia coli DH1  Bacteria  normal  0.814301  n/a   
 
 
-
 
CP001509  ECD_04204  predicted 2-hydroxyglutaryl-CoA dehydratase  25.07 
 
 		 383 aa  72.8  0.00000000001  Escherichia coli BL21(DE3)  Bacteria  normal  0.0605066  n/a   
 
 
-
 
NC_009712  Mboo_0863  2-hydroxyglutaryl-CoA dehydratase, D-component  21.95 
 
 		 426 aa  72.4  0.00000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0455624  normal  1 
 
 
-
 
NC_012892  B21_04167  hypothetical protein  25.07 
 
 		 383 aa  72.8  0.00000000001  Escherichia coli BL21  Bacteria  normal  0.0394396  n/a   
 
 
-
 
NC_010468  EcolC_3728  2-hydroxyglutaryl-CoA dehydratase D-component  25.07 
 
 		 383 aa  71.6  0.00000000002  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_1418  2-hydroxyglutaryl-CoA dehydratase, D-component  24.51 
 
 		 436 aa  72  0.00000000002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00133287  normal  0.906732 
 
 
-
 
NC_008751  Dvul_0706  2-hydroxyglutaryl-CoA dehydratase, D-component  23.18 
 
 		 380 aa  70.1  0.00000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  0.255737  normal  0.505258 
 
 
-
 
NC_013165  Shel_25470  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  25.68 
 
 		 425 aa  69.7  0.00000000007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_2401  2-hydroxyglutaryl-CoA dehydratase D-component  24.07 
 
 		 397 aa  69.3  0.0000000001  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_3161  2-hydroxyglutaryl-CoA dehydratase, D-component  23.33 
 
 		 382 aa  68.6  0.0000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_1465  2-hydroxyglutaryl-CoA dehydratase D-component  22.97 
 
 		 369 aa  66.6  0.0000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_0410  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  21.19 
 
 		 378 aa  64.3  0.000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.732282  n/a   
 
 
-
 
NC_007925  RPC_2055  2-hydroxyglutaryl-CoA dehydratase, D-component  22.06 
 
 		 376 aa  64.3  0.000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.574959  normal  0.736744 
 
 
-
 
NC_008609  Ppro_1278  2-hydroxyglutaryl-CoA dehydratase, D-component  23.3 
 
 		 413 aa  63.9  0.000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_007575  Suden_0273  2-hydroxyglutaryl-CoA dehydratase, D-component  23.01 
 
 		 422 aa  63.5  0.000000006  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_0785  2-hydroxyglutaryl-CoA dehydratase, D-component  26.72 
 
 		 420 aa  58.2  0.0000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.237879  normal  1 
 
 
-
 
NC_010718  Nther_1772  2-hydroxyglutaryl-CoA dehydratase D-component  21.25 
 
 		 358 aa  57.8  0.0000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.39587 
 
 
-
 
NC_009483  Gura_3877  2-hydroxyglutaryl-CoA dehydratase, D-component  23.58 
 
 		 395 aa  51.2  0.00003  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1771  2-hydroxyglutaryl-CoA dehydratase D-component  24.51 
 
 		 419 aa  47  0.0006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.433973 
 
 
-
 
NC_012034  Athe_0200  CoA-substrate-specific enzyme activase  25.37 
 
 		 539 aa  45.1  0.002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000427749  n/a   
 
 
-
 
NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  25.94 
 
 		 327 aa  44.7  0.003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009483  Gura_3878  2-hydroxyglutaryl-CoA dehydratase, D-component  23.08 
 
 		 472 aa  44.7  0.003  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
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