12 homologs were found in PanDaTox collection
for query gene Dgeo_2687 on replicon NC_008010
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008010  Dgeo_2687  xylanase Y  100 
 
 
106 aa  222  1e-57  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1298  glycoside hydrolase family 8  44.86 
 
 
477 aa  101  3e-21  Clostridium cellulolyticum H10  Bacteria  unclonable  0.0000000471564  n/a   
 
 
-
 
NC_008255  CHU_1240  bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein  38.32 
 
 
1748 aa  80.1  0.000000000000009  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.267391  normal  0.341436 
 
 
-
 
NC_011898  Ccel_1258  glycoside hydrolase family 8  37.38 
 
 
376 aa  74.7  0.0000000000003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1069  glycoside hydrolase family protein  35.78 
 
 
912 aa  74.3  0.0000000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1409  glycoside hydrolase family 8  31.09 
 
 
432 aa  63.5  0.0000000008  Spirosoma linguale DSM 74  Bacteria  normal  0.0686478  normal 
 
 
-
 
NC_009441  Fjoh_3868  glycoside hydrolase family protein  31.09 
 
 
430 aa  63.5  0.000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.347972  n/a   
 
 
-
 
NC_010571  Oter_4314  glycoside hydrolase family protein  31.13 
 
 
412 aa  62.8  0.000000001  Opitutus terrae PB90-1  Bacteria  normal  0.132007  normal 
 
 
-
 
NC_010001  Cphy_3207  glycoside hydrolase family protein  32.08 
 
 
381 aa  59.3  0.00000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4315  glycoside hydrolase family protein  33.33 
 
 
445 aa  57.8  0.00000005  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_0730  glycoside hydrolase family 8  27.18 
 
 
460 aa  49.7  0.00001  Clostridium cellulolyticum H10  Bacteria  normal  0.59724  n/a   
 
 
-
 
NC_009012  Cthe_0269  glycoside hydrolase family protein  25.24 
 
 
477 aa  42  0.003  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.275199  n/a   
 
 
-
 
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