More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_1069 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008025  Dgeo_1069  response regulator receiver protein  100 
 
 
128 aa  255  1e-67  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0511705  normal  0.476202 
 
 
-
 
NC_009675  Anae109_2029  response regulator receiver protein  44.35 
 
 
124 aa  100  5e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.371136 
 
 
-
 
NC_014212  Mesil_2092  response regulator receiver protein  40.34 
 
 
298 aa  97.4  6e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  0.748601  normal 
 
 
-
 
NC_007413  Ava_1030  response regulator receiver modulated diguanylate cyclase  40.17 
 
 
330 aa  93.6  8e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.33399 
 
 
-
 
NC_008609  Ppro_0713  response regulator receiver protein  37.19 
 
 
321 aa  93.2  1e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_02061  two-component response regulator  42.74 
 
 
248 aa  92  2e-18  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.540525 
 
 
-
 
NC_008816  A9601_01511  two-component response regulator  43.36 
 
 
248 aa  91.7  3e-18  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0136  two component transcriptional regulator  43.36 
 
 
248 aa  91.7  3e-18  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1500  two component transcriptional regulator  43.36 
 
 
248 aa  90.9  5e-18  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_01531  two-component response regulator  43.36 
 
 
248 aa  90.9  5e-18  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_01621  two-component response regulator  43.36 
 
 
248 aa  90.9  6e-18  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.367767  n/a   
 
 
-
 
NC_009483  Gura_1798  response regulator receiver protein  38.02 
 
 
421 aa  90.5  8e-18  Geobacter uraniireducens Rf4  Bacteria  normal  0.0425033  n/a   
 
 
-
 
NC_009767  Rcas_4344  two component transcriptional regulator  40.52 
 
 
239 aa  90.1  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.325933  normal  0.345767 
 
 
-
 
NC_009523  RoseRS_0195  two component transcriptional regulator  39.66 
 
 
243 aa  89.4  1e-17  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00716616 
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  37.19 
 
 
619 aa  89.7  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_013947  Snas_5345  two component transcriptional regulator, winged helix family  39.37 
 
 
230 aa  89.7  1e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.264155 
 
 
-
 
NC_008688  Pden_5113  response regulator receiver protein  41.53 
 
 
121 aa  90.1  1e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_5280  response regulator receiver modulated metal dependent phosphohydrolase  35 
 
 
348 aa  89.4  2e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.273072 
 
 
-
 
NC_008781  Pnap_0436  response regulator receiver protein  37.19 
 
 
370 aa  89.4  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3302  two component transcriptional regulator  37.1 
 
 
230 aa  89  2e-17  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.288231  normal  0.346827 
 
 
-
 
NC_011884  Cyan7425_1115  two component transcriptional regulator, winged helix family  38.21 
 
 
243 aa  88.6  2e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.0950226  normal 
 
 
-
 
NC_011729  PCC7424_2841  response regulator receiver modulated GAF sensor protein  35 
 
 
308 aa  88.2  3e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.585847 
 
 
-
 
NC_013216  Dtox_4328  multi-sensor signal transduction histidine kinase  34.17 
 
 
612 aa  88.6  3e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0367  multi-sensor signal transduction histidine kinase  37.1 
 
 
503 aa  88.2  4e-17  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0540164 
 
 
-
 
NC_008609  Ppro_0902  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.71 
 
 
718 aa  87.8  4e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  0.651526  n/a   
 
 
-
 
NC_007604  Synpcc7942_1453  two component transcriptional regulator  40.52 
 
 
244 aa  87.8  4e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  0.952418  normal  0.0249242 
 
 
-
 
NC_013411  GYMC61_2522  two component transcriptional regulator, winged helix family  37.29 
 
 
226 aa  87.8  4e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_4150  response regulator receiver protein  35 
 
 
125 aa  87.8  4e-17  Polaromonas sp. JS666  Bacteria  normal  normal  0.583085 
 
 
-
 
NC_010655  Amuc_1728  two component transcriptional regulator, winged helix family  39.02 
 
 
234 aa  87.8  5e-17  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.541096  normal 
 
 
-
 
NC_007484  Noc_0126  CheA signal transduction histidine kinase  36.44 
 
 
1758 aa  87.8  5e-17  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2205  multi-sensor hybrid histidine kinase  38.33 
 
 
887 aa  87.4  5e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.188088 
 
 
-
 
NC_009972  Haur_2343  two component transcriptional regulator  37.93 
 
 
243 aa  87.8  5e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00929975  n/a   
 
 
-
 
NC_010501  PputW619_0476  CheA signal transduction histidine kinase  38.1 
 
 
1629 aa  87.4  6e-17  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  35.59 
 
 
170 aa  87.4  6e-17  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_007298  Daro_2788  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  37.82 
 
 
715 aa  87  7e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.941936  normal 
 
 
-
 
NC_007404  Tbd_2552  response regulator receiver domain-containing protein  37.04 
 
 
130 aa  87  7e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_26531  two-component response regulator  41.59 
 
 
248 aa  87  7e-17  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_5611  two component transcriptional regulator, winged helix family  38.98 
 
 
235 aa  87  8e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.736991 
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  39.66 
 
 
247 aa  87  8e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013037  Dfer_4011  two component transcriptional regulator, winged helix family  37.7 
 
 
236 aa  87  8e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0268606  normal 
 
 
-
 
NC_011898  Ccel_0246  two component transcriptional regulator, winged helix family  35.25 
 
 
225 aa  87  8e-17  Clostridium cellulolyticum H10  Bacteria  normal  0.0272164  n/a   
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  39.66 
 
 
243 aa  87  8e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0817018 
 
 
-
 
NC_002939  GSU2046  response regulator  35 
 
 
404 aa  86.7  9e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.0829987  n/a   
 
 
-
 
NC_008340  Mlg_2054  response regulator receiver protein  34.96 
 
 
140 aa  86.7  9e-17  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0880044 
 
 
-
 
NC_013530  Xcel_2937  two component transcriptional regulator, winged helix family  39.66 
 
 
243 aa  86.3  1e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  39.17 
 
 
455 aa  86.3  1e-16  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  38.21 
 
 
242 aa  86.7  1e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.559477 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  40.16 
 
 
259 aa  86.7  1e-16  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0323  two component transcriptional regulator  40.18 
 
 
227 aa  86.7  1e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3143  response regulator receiver protein  33.9 
 
 
124 aa  86.7  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1136  response regulator receiver domain-containing protein  32.5 
 
 
132 aa  86.7  1e-16  Polaromonas sp. JS666  Bacteria  normal  normal  0.638067 
 
 
-
 
NC_007955  Mbur_0825  response regulator receiver  36.36 
 
 
204 aa  86.3  1e-16  Methanococcoides burtonii DSM 6242  Archaea  normal  0.751719  n/a   
 
 
-
 
NC_007969  Pcryo_2096  CheA signal transduction histidine kinases  35 
 
 
2301 aa  86.7  1e-16  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2025  response regulator receiver sensor signal transduction histidine kinase  34.43 
 
 
452 aa  85.5  2e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  39.66 
 
 
229 aa  85.9  2e-16  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_010524  Lcho_0237  response regulator receiver protein  38.89 
 
 
124 aa  85.9  2e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000555979 
 
 
-
 
NC_010814  Glov_2486  response regulator receiver protein  36.44 
 
 
385 aa  85.9  2e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2710  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  37.29 
 
 
704 aa  85.9  2e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00325078 
 
 
-
 
NC_012791  Vapar_4626  response regulator receiver protein  33.05 
 
 
132 aa  85.5  2e-16  Variovorax paradoxus S110  Bacteria  normal  0.664548  n/a   
 
 
-
 
NC_008740  Maqu_3772  CheA signal transduction histidine kinase  36.07 
 
 
2539 aa  85.9  2e-16  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  38.21 
 
 
242 aa  85.9  2e-16  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_013161  Cyan8802_2353  two component transcriptional regulator, winged helix family  38.21 
 
 
243 aa  85.1  3e-16  Cyanothece sp. PCC 8802  Bacteria  normal  0.0794558  normal 
 
 
-
 
NC_004347  SO_2426  DNA-binding response regulator  39.5 
 
 
237 aa  85.1  3e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.82 
 
 
231 aa  85.1  3e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  43.1 
 
 
246 aa  85.1  3e-16  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  37.07 
 
 
434 aa  85.1  3e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_011662  Tmz1t_3688  response regulator receiver protein  37.04 
 
 
133 aa  85.5  3e-16  Thauera sp. MZ1T  Bacteria  normal  0.478813  n/a   
 
 
-
 
NC_011726  PCC8801_2302  two component transcriptional regulator, winged helix family  38.21 
 
 
243 aa  85.1  3e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  33.33 
 
 
231 aa  85.1  3e-16  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  40.16 
 
 
234 aa  85.1  3e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  37.07 
 
 
434 aa  84.7  4e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_013595  Sros_8520  response regulator receiver protein  37.07 
 
 
224 aa  84.7  4e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.697367 
 
 
-
 
NC_007204  Psyc_1813  putative hybrid two-component sensor and regulatory protein  35.25 
 
 
2284 aa  84.3  5e-16  Psychrobacter arcticus 273-4  Bacteria  normal  0.409027  normal 
 
 
-
 
NC_011146  Gbem_1506  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  37.29 
 
 
704 aa  84.3  5e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  35.48 
 
 
1131 aa  84.3  5e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.257486 
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  36.75 
 
 
232 aa  84.3  5e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_01810  transcriptional regulatory protein  36.75 
 
 
226 aa  84  6e-16  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4687  two component transcriptional regulator, winged helix family  35.54 
 
 
230 aa  84  7e-16  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000000280381  n/a   
 
 
-
 
NC_011831  Cagg_2051  two component transcriptional regulator, winged helix family  36.21 
 
 
247 aa  83.6  7e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.520505  normal 
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  34.15 
 
 
230 aa  84  7e-16  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.305183 
 
 
-
 
NC_013739  Cwoe_1564  two component transcriptional regulator, winged helix family  47.17 
 
 
223 aa  84  7e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.194978  normal  0.692086 
 
 
-
 
NC_008789  Hhal_1901  response regulator receiver protein  34.17 
 
 
125 aa  84  7e-16  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  39.52 
 
 
230 aa  84  7e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  37.07 
 
 
229 aa  84  7e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_007513  Syncc9902_0308  two component transcriptional regulator  39.83 
 
 
248 aa  84  7e-16  Synechococcus sp. CC9902  Bacteria  normal  0.030574  n/a   
 
 
-
 
NC_013169  Ksed_04920  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.79 
 
 
222 aa  84  7e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3778  response regulator receiver domain-containing protein  39.34 
 
 
124 aa  84  7e-16  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5308  response regulator receiver domain-containing protein  35.14 
 
 
134 aa  83.6  8e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0630269  normal  0.22086 
 
 
-
 
NC_012803  Mlut_18360  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.93 
 
 
239 aa  83.6  9e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1572  response regulator receiver protein  33.91 
 
 
132 aa  83.6  9e-16  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.277281 
 
 
-
 
NC_012793  GWCH70_1656  response regulator receiver protein  38.33 
 
 
166 aa  83.6  9e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  31.71 
 
 
229 aa  83.2  0.000000000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal 
 
 
-
 
NC_011884  Cyan7425_4868  response regulator receiver protein  34.92 
 
 
143 aa  83.6  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  37.9 
 
 
331 aa  82.8  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_009524  PsycPRwf_2159  response regulator receiver protein  36.67 
 
 
129 aa  82.8  0.000000000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1710  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  35.65 
 
 
720 aa  83.2  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.425295  normal 
 
 
-
 
NC_008228  Patl_3542  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.33 
 
 
590 aa  83.2  0.000000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_01481  two-component response regulator  40.18 
 
 
248 aa  83.2  0.000000000000001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2725  two component transcriptional regulator  37.07 
 
 
226 aa  82.8  0.000000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0716975  n/a   
 
 
-
 
NC_008345  Sfri_4005  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.17 
 
 
696 aa  82.8  0.000000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
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