30 homologs were found in PanDaTox collection
for query gene Dgeo_0888 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008025  Dgeo_0888  succinate dehydrogenase, cytochrome b subunit  100 
 
 		 125 aa  257  4e-68  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.909665  normal  0.65854 
 
 
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NC_014212  Mesil_1436  succinate dehydrogenase, membrane subunit (SdhD)  45.53 
 
 		 130 aa  128  2.0000000000000002e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.269065  normal  1 
 
 
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NC_008541  Arth_1130  succinate dehydrogenase subunit D  41.96 
 
 		 164 aa  88.6  3e-17  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
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NC_011886  Achl_1203  putative succinate dehydrogenase, membrane subunit (SdhD)  41.07 
 
 		 153 aa  87.8  4e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000167837 
 
 
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NC_013131  Caci_0771  succinate dehydrogenase hydrophobic membrane anchor protein  38.21 
 
 		 151 aa  86.3  1e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.199675 
 
 
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NC_013525  Tter_0786  Succinate dehydrogenase hydrophobic anchor subunit-like protein  39.45 
 
 		 126 aa  83.6  9e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
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NC_014151  Cfla_1016  succinate dehydrogenase hydrophobic anchor subunit-like protein  38.71 
 
 		 152 aa  82  0.000000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_25810  succinate dehydrogenase subunit D  36.72 
 
 		 151 aa  81.6  0.000000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.297641  normal  0.918688 
 
 
-
 
NC_013159  Svir_05370  succinate dehydrogenase subunit D  44.95 
 
 		 138 aa  81.3  0.000000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.381398  normal  1 
 
 
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NC_012803  Mlut_04840  succinate dehydrogenase subunit D  41.96 
 
 		 159 aa  80.5  0.000000000000007  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_009664  Krad_3953  Succinate dehydrogenase hydrophobic anchor subunit-like  35.34 
 
 		 169 aa  78.2  0.00000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.0138946 
 
 
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NC_013530  Xcel_0989  Succinate dehydrogenase hydrophobic anchor subunit-like protein  37.61 
 
 		 155 aa  76.6  0.00000000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0299411  n/a   
 
 
-
 
NC_013441  Gbro_1777  Succinate dehydrogenase hydrophobic anchor subunit-like protein  35.59 
 
 		 153 aa  75.1  0.0000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6463  Succinate dehydrogenase hydrophobic anchor subunit-like protein  36.36 
 
 		 138 aa  73.6  0.0000000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_013172  Bfae_21320  succinate dehydrogenase subunit D  36.28 
 
 		 150 aa  73.6  0.0000000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0820  Succinate dehydrogenase hydrophobic anchor subunit-like protein  40.17 
 
 		 146 aa  72.4  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2951  succinate dehydrogenase cytochrome b556 subunit  39.39 
 
 		 152 aa  71.6  0.000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  decreased coverage  0.000110857 
 
 
-
 
NC_013124  Afer_0187  succinate dehydrogenase subunit D  37.17 
 
 		 125 aa  68.9  0.00000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0966  succinate dehydrogenase cytochrome b subunit  30.71 
 
 		 155 aa  65.5  0.0000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.151331  n/a   
 
 
-
 
NC_008146  Mmcs_1229  succinate dehydrogenase subunit D  34.43 
 
 		 159 aa  62.8  0.000000001  Mycobacterium sp. MCS  Bacteria  normal  0.510568  n/a   
 
 
-
 
NC_008705  Mkms_1246  succinate dehydrogenase subunit D  34.43 
 
 		 159 aa  62.8  0.000000001  Mycobacterium sp. KMS  Bacteria  normal  0.127095  normal  1 
 
 
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NC_009338  Mflv_4845  putative succinate dehydrogenase  36.36 
 
 		 167 aa  62  0.000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0680  succinate dehydrogenase subunit D  38.94 
 
 		 153 aa  61.6  0.000000003  Frankia sp. CcI3  Bacteria  normal  0.222986  normal  0.0344179 
 
 
-
 
NC_009077  Mjls_1255  succinate dehydrogenase subunit D  34.43 
 
 		 159 aa  61.6  0.000000004  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1588  putative succinate dehydrogenase  36.36 
 
 		 163 aa  61.2  0.000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.955713  normal  0.505457 
 
 
-
 
NC_009565  TBFG_13348  succinate dehydrogenase hydrophobic membrane anchor subunit sdhD  35.45 
 
 		 144 aa  60.1  0.000000009  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.258133 
 
 
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NC_011059  Paes_2256  succinate dehydrogenase, membrane subunit, putative  36.78 
 
 		 165 aa  50.4  0.000007  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0904861  normal  1 
 
 
-
 
NC_013235  Namu_1310  Succinate dehydrogenase hydrophobic anchor subunit-like protein  34.33 
 
 		 143 aa  46.6  0.0001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.419082  normal  0.999536 
 
 
-
 
NC_013595  Sros_3181  NTPase (NACHT family)-like protein  31.07 
 
 		 1150 aa  43.1  0.001  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00494273  normal  0.197936 
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  31 
 
 		 154 aa  41.6  0.003  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
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