11 homologs were found in PanDaTox collection
for query gene Dfer_4458 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_4458  hypothetical protein  100 
 
 
458 aa  943    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4495  hypothetical protein  54.23 
 
 
489 aa  489  1e-137  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.394846 
 
 
-
 
NC_007614  Nmul_A0462  hypothetical protein  51.37 
 
 
530 aa  421  1e-116  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.369233  n/a   
 
 
-
 
NC_013132  Cpin_5810  hypothetical protein  46.14 
 
 
442 aa  387  1e-106  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00960319 
 
 
-
 
NC_008255  CHU_2729  hypothetical protein  41.06 
 
 
476 aa  328  1.0000000000000001e-88  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.585762  normal 
 
 
-
 
NC_013162  Coch_0272  hypothetical protein  29.28 
 
 
418 aa  174  1.9999999999999998e-42  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0532  phosphate-selective porin O and P  24.03 
 
 
415 aa  52.4  0.00001  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000620522  normal 
 
 
-
 
NC_011901  Tgr7_0072  phosphate-selective porin O and P  21.72 
 
 
396 aa  50.8  0.00005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1204  phosphate-selective porin O and P  22.02 
 
 
403 aa  47  0.0008  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00755858  n/a   
 
 
-
 
NC_011666  Msil_2000  hypothetical protein  26.86 
 
 
418 aa  45.4  0.002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2939  outer membrane porin FmdC, putative  21.36 
 
 
406 aa  43.9  0.006  Geobacter sulfurreducens PCA  Bacteria  normal  0.440983  n/a   
 
 
-
 
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