22 homologs were found in PanDaTox collection
for query gene Dfer_3423 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_3423  plasmid stabilization system  100 
 
 
100 aa  208  2e-53  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.00000145668  normal 
 
 
-
 
NC_013132  Cpin_4658  hypothetical protein  38.04 
 
 
100 aa  75.1  0.0000000000003  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.0000145123  unclonable  0.0000000000000112336 
 
 
-
 
NC_010831  Cphamn1_1571  plasmid stabilization system  35.96 
 
 
100 aa  73.2  0.000000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4655  plasmid stabilization system  35.11 
 
 
100 aa  66.6  0.0000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.026638  normal  0.454528 
 
 
-
 
NC_009441  Fjoh_2399  plasmid stabilization system protein  31.91 
 
 
97 aa  63.9  0.0000000007  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.00225312  n/a   
 
 
-
 
NC_010831  Cphamn1_1059  plasmid stabilization system  32.61 
 
 
93 aa  57.4  0.00000006  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.059768  hitchhiker  0.0000840756 
 
 
-
 
NC_010831  Cphamn1_2139  plasmid stabilization system  31.52 
 
 
101 aa  54.7  0.0000004  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.857601  normal  0.128216 
 
 
-
 
NC_011060  Ppha_0349  hypothetical protein  36.76 
 
 
78 aa  53.9  0.0000006  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1013  hypothetical protein  28.26 
 
 
98 aa  51.6  0.000004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0055  hypothetical protein  28.26 
 
 
98 aa  49.3  0.00002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1705  plasmid stabilization system  28.57 
 
 
97 aa  48.9  0.00002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00614  Plasmid stabilization system  28.26 
 
 
98 aa  48.1  0.00004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.2967  n/a   
 
 
-
 
NC_010571  Oter_1938  plasmid stabilization system protein  32.14 
 
 
97 aa  47.4  0.00006  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1185  plasmid stabilization system  27.91 
 
 
107 aa  44.7  0.0004  Capnocytophaga ochracea DSM 7271  Bacteria  decreased coverage  0.000764617  n/a   
 
 
-
 
NC_007514  Cag_1322  hypothetical protein  26.44 
 
 
101 aa  44.7  0.0004  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000305152  n/a   
 
 
-
 
NC_007514  Cag_1130  hypothetical protein  26.67 
 
 
98 aa  45.1  0.0004  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0707  hypothetical protein  31.94 
 
 
97 aa  44.7  0.0005  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0685  hypothetical protein  29.79 
 
 
100 aa  44.3  0.0005  Chlorobium chlorochromatii CaD3  Bacteria  decreased coverage  0.00000000000390836  n/a   
 
 
-
 
NC_013173  Dbac_1113  plasmid stabilization system  32.35 
 
 
125 aa  44.3  0.0006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0273  hypothetical protein  27.78 
 
 
99 aa  44.3  0.0006  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1814  plasmid stabilization system  26.19 
 
 
99 aa  42  0.003  Pedobacter heparinus DSM 2366  Bacteria  unclonable  0.00000102584  decreased coverage  0.0000000000874198 
 
 
-
 
NC_007796  Mhun_0714  hypothetical protein  22.99 
 
 
99 aa  41.6  0.004  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.03519 
 
 
-
 
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