More than 300 homologs were found in PanDaTox collection
for query gene Dfer_2281 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_2281  two component transcriptional regulator, LuxR family  100 
 
 		 214 aa  432  1e-120  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  35.94 
 
 		 219 aa  143  2e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  32.87 
 
 		 219 aa  130  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  33.65 
 
 		 213 aa  129  3e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  33.17 
 
 		 212 aa  128  5.0000000000000004e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  33.02 
 
 		 219 aa  127  2.0000000000000002e-28  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  31.58 
 
 		 214 aa  125  4.0000000000000003e-28  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  31.78 
 
 		 215 aa  125  4.0000000000000003e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  31.6 
 
 		 219 aa  125  6e-28  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.39 
 
 		 222 aa  121  9e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  34.6 
 
 		 214 aa  120  1.9999999999999998e-26  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  32.56 
 
 		 211 aa  119  3.9999999999999996e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  35.85 
 
 		 213 aa  119  3.9999999999999996e-26  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  33.49 
 
 		 214 aa  119  3.9999999999999996e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  31.28 
 
 		 207 aa  118  4.9999999999999996e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  31.6 
 
 		 219 aa  118  6e-26  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  28.44 
 
 		 208 aa  118  7e-26  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  32.08 
 
 		 219 aa  118  7e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  32.39 
 
 		 226 aa  117  9.999999999999999e-26  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  33.18 
 
 		 218 aa  117  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  33 
 
 		 213 aa  115  3e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  31.28 
 
 		 210 aa  115  3.9999999999999997e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  29.91 
 
 		 219 aa  115  5e-25  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_6441  two component transcriptional regulator, LuxR family  34.26 
 
 		 213 aa  115  5e-25  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  34.26 
 
 		 223 aa  115  5e-25  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal  1 
 
 
-
 
NC_008786  Veis_2180  two component LuxR family transcriptional regulator  31.92 
 
 		 209 aa  115  6e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.876214 
 
 
-
 
NC_013132  Cpin_2137  two component transcriptional regulator, LuxR family  33.82 
 
 		 211 aa  115  6.9999999999999995e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0335187  normal  1 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.16 
 
 		 221 aa  114  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  31.28 
 
 		 210 aa  114  1.0000000000000001e-24  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  29.38 
 
 		 219 aa  114  1.0000000000000001e-24  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  32.68 
 
 		 233 aa  114  1.0000000000000001e-24  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  29.44 
 
 		 221 aa  114  1.0000000000000001e-24  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5845  two component transcriptional regulator, LuxR family  31.51 
 
 		 219 aa  113  2.0000000000000002e-24  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.715181 
 
 
-
 
NC_008255  CHU_1317  response regulator  32.27 
 
 		 220 aa  112  3e-24  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  30.81 
 
 		 210 aa  113  3e-24  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_5915  two component transcriptional regulator, LuxR family  34.8 
 
 		 207 aa  113  3e-24  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00974735  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  32.26 
 
 		 217 aa  112  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  30.33 
 
 		 210 aa  112  5e-24  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  29.44 
 
 		 213 aa  111  6e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  30.37 
 
 		 218 aa  111  8.000000000000001e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  30.99 
 
 		 215 aa  111  8.000000000000001e-24  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  31.48 
 
 		 222 aa  111  9e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  29.86 
 
 		 210 aa  110  1.0000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  29.95 
 
 		 233 aa  110  1.0000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  31.92 
 
 		 221 aa  111  1.0000000000000001e-23  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  32.04 
 
 		 215 aa  110  1.0000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  28.17 
 
 		 214 aa  110  1.0000000000000001e-23  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  29.11 
 
 		 227 aa  110  1.0000000000000001e-23  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  31.43 
 
 		 215 aa  110  2.0000000000000002e-23  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  30.56 
 
 		 222 aa  110  2.0000000000000002e-23  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  31.8 
 
 		 216 aa  110  2.0000000000000002e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  30.56 
 
 		 222 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  29.63 
 
 		 209 aa  110  2.0000000000000002e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.26 
 
 		 232 aa  109  2.0000000000000002e-23  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  31.63 
 
 		 215 aa  110  2.0000000000000002e-23  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_010172  Mext_1668  response regulator receiver  30.56 
 
 		 222 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  31.78 
 
 		 215 aa  110  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.37 
 
 		 216 aa  110  2.0000000000000002e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  30.66 
 
 		 213 aa  109  3e-23  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  32.54 
 
 		 213 aa  109  3e-23  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  30.66 
 
 		 213 aa  109  3e-23  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  31.13 
 
 		 206 aa  109  3e-23  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  28.78 
 
 		 220 aa  109  3e-23  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  30.81 
 
 		 214 aa  108  4.0000000000000004e-23  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  29.27 
 
 		 214 aa  108  5e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  27.57 
 
 		 215 aa  108  5e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  30.99 
 
 		 227 aa  108  6e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_013739  Cwoe_5387  two component transcriptional regulator, LuxR family  29.68 
 
 		 215 aa  108  6e-23  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  30.37 
 
 		 218 aa  108  7.000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  30.37 
 
 		 218 aa  108  7.000000000000001e-23  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  34.26 
 
 		 232 aa  108  8.000000000000001e-23  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  28.3 
 
 		 220 aa  107  9.000000000000001e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  31.16 
 
 		 210 aa  108  9.000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  32.47 
 
 		 209 aa  107  9.000000000000001e-23  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  30.19 
 
 		 209 aa  108  9.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  31.22 
 
 		 206 aa  107  1e-22  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_30650  response regulator GacA  27.49 
 
 		 214 aa  107  1e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00700013 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  30.33 
 
 		 209 aa  107  1e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_2613  response regulator GacA  27.49 
 
 		 214 aa  107  1e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  0.466832  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  33.33 
 
 		 232 aa  107  2e-22  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  30.33 
 
 		 238 aa  107  2e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  31.63 
 
 		 210 aa  107  2e-22  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  31.94 
 
 		 218 aa  106  2e-22  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_007614  Nmul_A1235  two component LuxR family transcriptional regulator  30.81 
 
 		 211 aa  107  2e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  29.44 
 
 		 218 aa  106  2e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  29.19 
 
 		 228 aa  107  2e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  27.91 
 
 		 224 aa  106  2e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  29.52 
 
 		 216 aa  107  2e-22  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  29.86 
 
 		 228 aa  106  2e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  31.31 
 
 		 213 aa  107  2e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  31.92 
 
 		 212 aa  107  2e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  30 
 
 		 213 aa  107  2e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  29.05 
 
 		 216 aa  106  3e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  30.37 
 
 		 221 aa  106  3e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  29.58 
 
 		 219 aa  106  3e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  28.91 
 
 		 228 aa  106  3e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  31.78 
 
 		 213 aa  105  4e-22  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  30.81 
 
 		 210 aa  105  4e-22  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  32.39 
 
 		 213 aa  105  4e-22  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_013132  Cpin_5476  two component transcriptional regulator, LuxR family  29.22 
 
 		 219 aa  105  5e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.21854 
 
 
-
 
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