9 homologs were found in PanDaTox collection
for query gene Dfer_2054 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_2054  signal peptide  100 
 
 
304 aa  630  1e-180  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_0627  protein of unknown function DUF1080  49.45 
 
 
558 aa  268  1e-70  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3539  hypothetical protein  43.55 
 
 
514 aa  207  2e-52  Opitutus terrae PB90-1  Bacteria  normal  0.294562  normal 
 
 
-
 
NC_013730  Slin_2650  hypothetical protein  39.93 
 
 
280 aa  206  3e-52  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00000246514  normal  0.362858 
 
 
-
 
NC_013037  Dfer_4288  membrane-bound dehydrogenase domain protein  25.63 
 
 
1274 aa  51.6  0.00002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0811  hypothetical protein  26.47 
 
 
245 aa  48.1  0.0002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.8275 
 
 
-
 
NC_013525  Tter_1236  protein of unknown function DUF1037  26.15 
 
 
239 aa  46.2  0.0006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2202  protein of unknown function DUF1037  26.19 
 
 
240 aa  45.4  0.001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.468062  n/a   
 
 
-
 
NC_013037  Dfer_4698  membrane-bound dehydrogenase domain protein  25.74 
 
 
1180 aa  42.7  0.007  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.159588  normal 
 
 
-
 
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