13 homologs were found in PanDaTox collection
for query gene Ddes_2233 on replicon NC_011883
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011883  Ddes_2233  transcriptional regulator, XRE family  100 
 
 		 107 aa  210  4.9999999999999996e-54  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0669523  n/a   
 
 
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NC_009921  Franean1_1330  XRE family transcriptional regulator  38.46 
 
 		 404 aa  45.4  0.0002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_1158  XRE family transcriptional regulator  36.36 
 
 		 179 aa  45.1  0.0003  Staphylococcus aureus subsp. aureus JH9  Bacteria  decreased coverage  0.00000119717  n/a   
 
 
-
 
NC_009632  SaurJH1_1180  helix-turn-helix domain-containing protein  36.36 
 
 		 179 aa  45.1  0.0003  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_012853  Rleg_5723  transcriptional regulator, XRE family  34.29 
 
 		 90 aa  43.1  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.118479  normal  0.785242 
 
 
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NC_010338  Caul_1992  XRE family transcriptional regulator  31.94 
 
 		 74 aa  42.7  0.002  Caulobacter sp. K31  Bacteria  normal  0.979113  normal  1 
 
 
-
 
NC_013216  Dtox_1454  transcriptional regulator, XRE family  33.8 
 
 		 116 aa  42.7  0.002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2246  XRE family transcriptional regulator  28.3 
 
 		 117 aa  42  0.003  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_1668  transcriptional regulator, XRE family  30.68 
 
 		 256 aa  41.6  0.004  Ammonifex degensii KC4  Bacteria  hitchhiker  0.0000000231765  n/a   
 
 
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NC_008576  Mmc1_0831  XRE family transcriptional regulator  34.25 
 
 		 183 aa  40.8  0.006  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000078794  normal  0.173113 
 
 
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NC_012034  Athe_2483  transcriptional regulator, XRE family  39.39 
 
 		 143 aa  40.8  0.006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0459  transcriptional regulator, XRE family  35.94 
 
 		 81 aa  40.4  0.007  Ralstonia pickettii 12J  Bacteria  normal  0.995488  normal  0.299966 
 
 
-
 
NC_012791  Vapar_0596  transcriptional regulator, XRE family  25.4 
 
 		 90 aa  40.4  0.007  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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