More than 300 homologs were found in PanDaTox collection
for query gene Ddes_0740 on replicon NC_011883
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011883  Ddes_0740  Holliday junction resolvase  100 
 
 
173 aa  352  1e-96  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.100777  n/a   
 
 
-
 
NC_008751  Dvul_0987  Holliday junction resolvase  60.12 
 
 
166 aa  198  1.9999999999999998e-50  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.221378 
 
 
-
 
NC_011769  DvMF_3202  Holliday junction resolvase  62.82 
 
 
197 aa  196  1.0000000000000001e-49  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0673445 
 
 
-
 
NC_007519  Dde_2324  Holliday junction resolvase  66.46 
 
 
166 aa  196  2.0000000000000003e-49  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.747333  n/a   
 
 
-
 
NC_013223  Dret_1747  Holliday junction resolvase  53.57 
 
 
170 aa  176  2e-43  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.607448  normal  0.595925 
 
 
-
 
NC_013173  Dbac_3491  Holliday junction resolvase  56.33 
 
 
173 aa  172  1.9999999999999998e-42  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  48.03 
 
 
164 aa  140  9.999999999999999e-33  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  48.03 
 
 
164 aa  140  9.999999999999999e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  42.86 
 
 
180 aa  139  9.999999999999999e-33  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  50 
 
 
164 aa  139  1.9999999999999998e-32  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_008639  Cpha266_0539  crossover junction endodeoxyribonuclease RuvC  45.75 
 
 
187 aa  139  1.9999999999999998e-32  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  42.68 
 
 
166 aa  139  3e-32  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  49.33 
 
 
164 aa  134  5e-31  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  44.79 
 
 
173 aa  132  1.9999999999999998e-30  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_010803  Clim_0476  crossover junction endodeoxyribonuclease RuvC  43.79 
 
 
190 aa  132  1.9999999999999998e-30  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  48.34 
 
 
176 aa  132  3e-30  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  44.51 
 
 
173 aa  130  6.999999999999999e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  44.17 
 
 
173 aa  130  7.999999999999999e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002977  MCA1221  crossover junction endodeoxyribonuclease RuvC  47.74 
 
 
165 aa  129  2.0000000000000002e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.69785  n/a   
 
 
-
 
NC_009656  PSPA7_4543  Holliday junction resolvase  45.33 
 
 
174 aa  128  4.0000000000000003e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3065  Holliday junction resolvase  46.79 
 
 
169 aa  128  4.0000000000000003e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  0.31187  normal  0.469914 
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  45.4 
 
 
173 aa  127  5.0000000000000004e-29  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_008463  PA14_51800  Holliday junction resolvase  45.33 
 
 
174 aa  128  5.0000000000000004e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000486306 
 
 
-
 
NC_009439  Pmen_1270  Holliday junction resolvase  45.16 
 
 
174 aa  127  6e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.460583  normal  0.748169 
 
 
-
 
NC_004578  PSPTO_3979  crossover junction endodeoxyribonuclease RuvC  44.81 
 
 
176 aa  127  6e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.175883  n/a   
 
 
-
 
NC_011060  Ppha_0658  crossover junction endodeoxyribonuclease RuvC  41.18 
 
 
191 aa  126  2.0000000000000002e-28  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.545827  n/a   
 
 
-
 
NC_007005  Psyr_1408  Holliday junction resolvase  45.45 
 
 
174 aa  125  2.0000000000000002e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0741674  normal 
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  42.94 
 
 
173 aa  125  3e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_008009  Acid345_3618  crossover junction endodeoxyribonuclease RuvC  48.03 
 
 
166 aa  124  4.0000000000000003e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.1831  normal  0.457471 
 
 
-
 
NC_007492  Pfl01_4409  Holliday junction resolvase  43.87 
 
 
175 aa  124  6e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.049138  normal 
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  44.67 
 
 
171 aa  124  7e-28  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_010831  Cphamn1_0543  crossover junction endodeoxyribonuclease RuvC  42.38 
 
 
186 aa  124  7e-28  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  41.45 
 
 
162 aa  124  9e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0497  crossover junction endodeoxyribonuclease RuvC  40.52 
 
 
187 aa  124  9e-28  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.655461  normal 
 
 
-
 
NC_008740  Maqu_1706  crossover junction endodeoxyribonuclease RuvC  45.8 
 
 
175 aa  124  9e-28  Marinobacter aquaeolei VT8  Bacteria  normal  0.0826466  n/a   
 
 
-
 
NC_013739  Cwoe_3179  crossover junction endodeoxyribonuclease RuvC  42.5 
 
 
164 aa  123  1e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal 
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  42.33 
 
 
173 aa  123  1e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_008309  HS_0509  Holliday junction resolvase  46.62 
 
 
189 aa  123  1e-27  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2493  Holliday junction resolvase  47.68 
 
 
165 aa  123  1e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  44.67 
 
 
161 aa  122  2e-27  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_009438  Sputcn32_1937  Holliday junction resolvase  43.9 
 
 
173 aa  122  3e-27  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00155576  n/a   
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  39.47 
 
 
164 aa  122  3e-27  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1364  crossover junction endodeoxyribonuclease RuvC  41.61 
 
 
162 aa  122  3e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.553646  n/a   
 
 
-
 
NC_013061  Phep_0400  crossover junction endodeoxyribonuclease RuvC  41.33 
 
 
187 aa  122  3e-27  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.253093 
 
 
-
 
NC_009767  Rcas_0719  Holliday junction resolvase  44.3 
 
 
168 aa  121  4e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1900  Holliday junction resolvase  44.51 
 
 
173 aa  121  4e-27  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000300533  hitchhiker  0.000114763 
 
 
-
 
NC_008322  Shewmr7_2078  Holliday junction resolvase  44.51 
 
 
173 aa  121  4e-27  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000308371  hitchhiker  0.00162508 
 
 
-
 
NC_007512  Plut_1642  crossover junction endodeoxyribonuclease RuvC  41.83 
 
 
191 aa  121  5e-27  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0164  crossover junction endodeoxyribonuclease RuvC  39.74 
 
 
192 aa  121  5e-27  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4170  Holliday junction resolvase  48.09 
 
 
232 aa  121  6e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.257178  normal 
 
 
-
 
NC_008577  Shewana3_1955  Holliday junction resolvase  42.94 
 
 
173 aa  120  7e-27  Shewanella sp. ANA-3  Bacteria  normal  0.0326541  normal  0.873797 
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  39.47 
 
 
159 aa  120  8e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  43.33 
 
 
167 aa  120  8e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_010338  Caul_0784  Holliday junction resolvase  43.31 
 
 
169 aa  120  9.999999999999999e-27  Caulobacter sp. K31  Bacteria  normal  0.193363  normal  0.216447 
 
 
-
 
NC_004347  SO_2431  Holliday junction resolvase  43.9 
 
 
173 aa  119  1.9999999999999998e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_4363  Holliday junction resolvase  44.97 
 
 
168 aa  119  1.9999999999999998e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.140829 
 
 
-
 
NC_007778  RPB_4272  Holliday junction resolvase  46.56 
 
 
198 aa  119  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0821163  normal 
 
 
-
 
NC_008783  BARBAKC583_0151  Holliday junction resolvase  38.85 
 
 
167 aa  119  1.9999999999999998e-26  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0696  crossover junction endodeoxyribonuclease RuvC  45.1 
 
 
164 aa  119  1.9999999999999998e-26  Paracoccus denitrificans PD1222  Bacteria  normal  0.381333  normal  0.521985 
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  39.88 
 
 
173 aa  119  1.9999999999999998e-26  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_010681  Bphyt_3343  Holliday junction resolvase  41.33 
 
 
180 aa  119  3e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00888007 
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  37.18 
 
 
164 aa  118  3e-26  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4806  Holliday junction resolvase  42.42 
 
 
175 aa  119  3e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0617  Holliday junction resolvase  41.33 
 
 
180 aa  118  3e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.481352 
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  38.61 
 
 
161 aa  118  3.9999999999999996e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_007406  Nwi_2726  Holliday junction resolvase  44.24 
 
 
172 aa  118  4.9999999999999996e-26  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2354  Holliday junction resolvase  42.86 
 
 
180 aa  118  4.9999999999999996e-26  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.542113 
 
 
-
 
NC_011206  Lferr_0061  Holliday junction resolvase  45.77 
 
 
185 aa  118  4.9999999999999996e-26  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0317029  normal  0.843846 
 
 
-
 
NC_007912  Sde_2535  Holliday junction resolvase  45.39 
 
 
173 aa  117  6e-26  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.278528 
 
 
-
 
NC_011663  Sbal223_2042  Holliday junction resolvase  43.29 
 
 
173 aa  117  7e-26  Shewanella baltica OS223  Bacteria  hitchhiker  0.000214475  hitchhiker  0.0000000571856 
 
 
-
 
NC_009665  Shew185_2305  Holliday junction resolvase  43.29 
 
 
173 aa  117  7e-26  Shewanella baltica OS185  Bacteria  hitchhiker  0.00234267  n/a   
 
 
-
 
NC_009052  Sbal_2040  Holliday junction resolvase  43.29 
 
 
173 aa  117  7e-26  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000000885772  n/a   
 
 
-
 
NC_008060  Bcen_0207  Holliday junction resolvase  44.37 
 
 
180 aa  117  7e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2421  Holliday junction resolvase  43.29 
 
 
173 aa  117  7e-26  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000504743  normal  0.0281023 
 
 
-
 
NC_008542  Bcen2424_0690  Holliday junction resolvase  44.37 
 
 
180 aa  117  7e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1878  Holliday junction resolvase  43.24 
 
 
172 aa  117  7e-26  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.00784729  n/a   
 
 
-
 
NC_009831  Ssed_2032  Holliday junction resolvase  41.72 
 
 
173 aa  117  7.999999999999999e-26  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00302461  normal 
 
 
-
 
NC_013162  Coch_0079  Holliday junction resolvase  38.41 
 
 
181 aa  117  7.999999999999999e-26  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2595  Holliday junction resolvase  42.77 
 
 
164 aa  117  9e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00143043 
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  38 
 
 
165 aa  117  9e-26  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_010508  Bcenmc03_0657  Holliday junction resolvase  44.37 
 
 
180 aa  117  9e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1244  Holliday junction resolvase  45.45 
 
 
174 aa  116  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  0.61539  normal 
 
 
-
 
NC_011365  Gdia_1218  Holliday junction resolvase  44.38 
 
 
168 aa  117  9.999999999999999e-26  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.806199 
 
 
-
 
NC_002947  PP_1215  Holliday junction resolvase  45.45 
 
 
174 aa  116  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  0.0458654  normal 
 
 
-
 
NC_009667  Oant_1211  Holliday junction resolvase  41.72 
 
 
172 aa  116  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1647  Holliday junction resolvase  41.1 
 
 
173 aa  117  9.999999999999999e-26  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4203  Holliday junction resolvase  45.45 
 
 
174 aa  116  9.999999999999999e-26  Pseudomonas putida GB-1  Bacteria  normal  0.0438295  normal 
 
 
-
 
NC_007964  Nham_3523  Holliday junction resolvase  45.45 
 
 
178 aa  116  9.999999999999999e-26  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0583  Holliday junction resolvase  44.37 
 
 
183 aa  117  9.999999999999999e-26  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0609  Holliday junction resolvase  44.37 
 
 
183 aa  117  9.999999999999999e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.385188  normal  0.439523 
 
 
-
 
NC_004310  BR1704  Holliday junction resolvase  41.1 
 
 
173 aa  115  1.9999999999999998e-25  Brucella suis 1330  Bacteria  normal  0.723247  n/a   
 
 
-
 
NC_009092  Shew_2077  Holliday junction resolvase  42.68 
 
 
173 aa  116  1.9999999999999998e-25  Shewanella loihica PV-4  Bacteria  normal  0.414118  normal 
 
 
-
 
NC_009524  PsycPRwf_1433  Holliday junction resolvase  42.58 
 
 
194 aa  115  1.9999999999999998e-25  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0060  Holliday junction resolvase  47.01 
 
 
166 aa  115  3e-25  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3776  Holliday junction resolvase  43.05 
 
 
180 aa  115  3e-25  Burkholderia sp. 383  Bacteria  normal  0.518042  normal 
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  37.66 
 
 
160 aa  115  3e-25  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_007794  Saro_0421  crossover junction endodeoxyribonuclease RuvC  44.16 
 
 
158 aa  115  3e-25  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.300701  n/a   
 
 
-
 
NC_002950  PG1324  Holliday junction resolvase  37.91 
 
 
189 aa  115  3.9999999999999997e-25  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_6909  Holliday junction resolvase  44.27 
 
 
175 aa  114  5e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.293196 
 
 
-
 
NC_011666  Msil_0002  Holliday junction resolvase  43.28 
 
 
176 aa  114  5e-25  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
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