More than 300 homologs were found in PanDaTox collection
for query gene Dd1591_1178 on replicon NC_012912
Organism: Dickeya zeae Ech1591



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_1178  short-chain dehydrogenase/reductase SDR  100 
 
 
239 aa  485  1e-136  Dickeya zeae Ech1591  Bacteria  normal  0.300792  n/a   
 
 
-
 
NC_009436  Ent638_1490  short-chain dehydrogenase/reductase SDR  75.21 
 
 
239 aa  375  1e-103  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2097  short-chain dehydrogenase/reductase SDR  53.36 
 
 
238 aa  243  1.9999999999999999e-63  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.434652  n/a   
 
 
-
 
NC_011138  MADE_01434  Short chain dehydrogenase family protein  47.41 
 
 
239 aa  225  6e-58  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1329  short-chain dehydrogenase/reductase SDR  43.64 
 
 
238 aa  211  4.9999999999999996e-54  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.371699  n/a   
 
 
-
 
NC_013456  VEA_003864  oxidoreductase short-chain dehydrogenase/reductase family  45.57 
 
 
241 aa  207  1e-52  Vibrio sp. Ex25  Bacteria  normal  0.013707  n/a   
 
 
-
 
NC_009783  VIBHAR_01815  short chain dehydrogenase  47.26 
 
 
241 aa  206  3e-52  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0637  short chain dehydrogenase  46.67 
 
 
241 aa  205  5e-52  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000368636  n/a   
 
 
-
 
NC_007954  Sden_3371  short-chain dehydrogenase/reductase SDR  45.99 
 
 
239 aa  196  2.0000000000000003e-49  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1481  short-chain dehydrogenase/reductase SDR  47.9 
 
 
240 aa  194  9e-49  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2712  short-chain dehydrogenase/reductase SDR  45.2 
 
 
275 aa  194  1e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1167  short-chain dehydrogenase/reductase SDR  47.01 
 
 
266 aa  194  1e-48  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1238  short-chain dehydrogenase/reductase SDR  46.61 
 
 
266 aa  194  1e-48  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1168  short-chain dehydrogenase/reductase SDR  46.61 
 
 
266 aa  194  1e-48  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2775  short-chain dehydrogenase/reductase SDR  44.96 
 
 
238 aa  189  2.9999999999999997e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  0.88847  normal  0.739494 
 
 
-
 
NC_009997  Sbal195_3209  short-chain dehydrogenase/reductase SDR  47.46 
 
 
266 aa  189  4e-47  Shewanella baltica OS195  Bacteria  normal  normal  0.857449 
 
 
-
 
NC_011663  Sbal223_1311  short-chain dehydrogenase/reductase SDR  45.45 
 
 
266 aa  188  5.999999999999999e-47  Shewanella baltica OS223  Bacteria  normal  normal  0.978372 
 
 
-
 
NC_009052  Sbal_3052  short-chain dehydrogenase/reductase SDR  47.86 
 
 
266 aa  188  8e-47  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3382  short chain dehydrogenase/reductase family oxidoreductase  45.08 
 
 
266 aa  186  2e-46  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_3066  short-chain dehydrogenase/reductase SDR  46.58 
 
 
266 aa  184  1.0000000000000001e-45  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0813  short chain dehydrogenase/reductase family oxidoreductase  46.96 
 
 
253 aa  182  4.0000000000000006e-45  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1000  short-chain dehydrogenase/reductase SDR  39.17 
 
 
240 aa  176  2e-43  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1382  short chain dehydrogenase/reductase family oxidoreductase  40.83 
 
 
251 aa  171  1e-41  Colwellia psychrerythraea 34H  Bacteria  normal  0.0851667  n/a   
 
 
-
 
NC_008740  Maqu_1484  short-chain dehydrogenase/reductase SDR  43.33 
 
 
260 aa  167  1e-40  Marinobacter aquaeolei VT8  Bacteria  normal  0.591298  n/a   
 
 
-
 
NC_008345  Sfri_3034  short-chain dehydrogenase/reductase SDR  44.4 
 
 
249 aa  167  2e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.377805  n/a   
 
 
-
 
NC_002947  PP_2737  short chain dehydrogenase/reductase family oxidoreductase  43.15 
 
 
250 aa  164  1.0000000000000001e-39  Pseudomonas putida KT2440  Bacteria  normal  0.420132  normal 
 
 
-
 
NC_009512  Pput_3016  short-chain dehydrogenase/reductase SDR  43.15 
 
 
250 aa  164  2.0000000000000002e-39  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3172  short-chain dehydrogenase/reductase SDR  41.91 
 
 
250 aa  162  4.0000000000000004e-39  Pseudomonas putida W619  Bacteria  normal  0.0471693  normal 
 
 
-
 
NC_007969  Pcryo_0727  short-chain dehydrogenase/reductase SDR  39.38 
 
 
245 aa  158  7e-38  Psychrobacter cryohalolentis K5  Bacteria  decreased coverage  0.00978147  normal 
 
 
-
 
NC_007963  Csal_0463  short-chain dehydrogenase/reductase SDR  40.98 
 
 
264 aa  157  1e-37  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2099  short-chain dehydrogenase/reductase SDR  43.57 
 
 
250 aa  157  2e-37  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1069  short-chain dehydrogenase/reductase SDR  39.02 
 
 
251 aa  154  9e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2469  TonB-dependent receptor  43.1 
 
 
265 aa  154  1e-36  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4738  Short-chain dehydrogenase/reductase SDR  41.91 
 
 
260 aa  152  2.9999999999999998e-36  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.9226  normal  0.284155 
 
 
-
 
NC_009654  Mmwyl1_4073  short-chain dehydrogenase/reductase SDR  41.15 
 
 
252 aa  152  4e-36  Marinomonas sp. MWYL1  Bacteria  normal  0.576341  normal 
 
 
-
 
NC_007005  Psyr_0959  Short-chain dehydrogenase/reductase SDR  40.74 
 
 
262 aa  151  1e-35  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1175  short-chain dehydrogenase/reductase SDR  35.71 
 
 
254 aa  139  6e-32  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1119  oxidoreductase, short chain dehydrogenase/reductase family  39.34 
 
 
262 aa  137  2e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2391  short-chain dehydrogenase/reductase SDR  37.04 
 
 
260 aa  133  1.9999999999999998e-30  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2964  short-chain dehydrogenase/reductase SDR  37.45 
 
 
260 aa  133  1.9999999999999998e-30  Acidovorax sp. JS42  Bacteria  normal  normal  0.166977 
 
 
-
 
NC_011989  Avi_0085  gluconate 5-dehydrogenase  38.79 
 
 
256 aa  133  3e-30  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1398  short-chain dehydrogenase/reductase SDR  36.25 
 
 
249 aa  127  1.0000000000000001e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.646056  n/a   
 
 
-
 
NC_010524  Lcho_0468  short-chain dehydrogenase/reductase SDR  33.75 
 
 
257 aa  125  4.0000000000000003e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_1727  short-chain dehydrogenase/reductase SDR  36.24 
 
 
265 aa  126  4.0000000000000003e-28  Acidiphilium cryptum JF-5  Bacteria  normal  0.218017  n/a   
 
 
-
 
NC_013422  Hneap_1889  short-chain dehydrogenase/reductase SDR  33.2 
 
 
256 aa  124  2e-27  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3539  short-chain dehydrogenase/reductase SDR  36.65 
 
 
271 aa  123  3e-27  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0375  short-chain dehydrogenase/reductase SDR  35.48 
 
 
254 aa  123  3e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  0.187579 
 
 
-
 
NC_008825  Mpe_A0230  hypothetical protein  36.96 
 
 
261 aa  123  3e-27  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.599536 
 
 
-
 
NC_012850  Rleg_1619  short-chain dehydrogenase/reductase SDR  33.88 
 
 
277 aa  121  9.999999999999999e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.44916 
 
 
-
 
NC_009379  Pnuc_1974  short-chain dehydrogenase/reductase SDR  31.84 
 
 
258 aa  120  1.9999999999999998e-26  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1059  short-chain dehydrogenase/reductase SDR  37 
 
 
300 aa  118  7e-26  Thauera sp. MZ1T  Bacteria  normal  0.261261  n/a   
 
 
-
 
NC_011369  Rleg2_1440  short-chain dehydrogenase/reductase SDR  33.06 
 
 
277 aa  117  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.313918 
 
 
-
 
NC_007298  Daro_0496  Short-chain dehydrogenase/reductase SDR  37.55 
 
 
251 aa  117  1.9999999999999998e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.661007 
 
 
-
 
NC_009636  Smed_1362  short-chain dehydrogenase/reductase SDR  35.54 
 
 
282 aa  116  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  0.390824  normal 
 
 
-
 
NC_010581  Bind_0286  short-chain dehydrogenase/reductase SDR  36.6 
 
 
267 aa  113  3e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1455  short-chain dehydrogenase/reductase SDR  34.05 
 
 
260 aa  113  3e-24  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.271159  normal 
 
 
-
 
NC_010505  Mrad2831_0946  short-chain dehydrogenase/reductase SDR  34.43 
 
 
255 aa  111  8.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.841301 
 
 
-
 
NC_008044  TM1040_0408  short-chain dehydrogenase/reductase SDR  33.19 
 
 
240 aa  110  2.0000000000000002e-23  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_3307  short chain dehydrogenase  34.6 
 
 
261 aa  108  6e-23  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0864591  n/a   
 
 
-
 
NC_011206  Lferr_2904  short chain dehydrogenase  34.6 
 
 
261 aa  108  6e-23  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.000166666  decreased coverage  0.000436169 
 
 
-
 
NC_013162  Coch_1577  short-chain dehydrogenase/reductase SDR  29.69 
 
 
246 aa  107  1e-22  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.444612  n/a   
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  29.06 
 
 
242 aa  106  3e-22  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0729  Short-chain dehydrogenase/reductase SDR  34.47 
 
 
259 aa  106  4e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.503076  n/a   
 
 
-
 
NC_010581  Bind_1222  short-chain dehydrogenase/reductase SDR  34.02 
 
 
258 aa  106  4e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.461582  normal 
 
 
-
 
NC_007614  Nmul_A2453  short chain dehydrogenase  32.92 
 
 
261 aa  105  9e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1220  short-chain dehydrogenase/reductase SDR  34.01 
 
 
267 aa  103  3e-21  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0396452 
 
 
-
 
NC_007336  Reut_C6102  Short-chain dehydrogenase/reductase SDR  35.12 
 
 
264 aa  102  4e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.0605001  n/a   
 
 
-
 
NC_010002  Daci_5880  short-chain dehydrogenase/reductase SDR  32.08 
 
 
263 aa  101  1e-20  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.195504 
 
 
-
 
NC_007298  Daro_3863  short chain dehydrogenase  34.02 
 
 
260 aa  101  1e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.331172  normal 
 
 
-
 
NC_006348  BMA2291  short chain dehydrogenase/reductase family oxidoreductase  33.88 
 
 
262 aa  100  2e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  0.448302  n/a   
 
 
-
 
NC_009076  BURPS1106A_3273  short chain dehydrogenase/reductase family oxidoreductase  33.88 
 
 
262 aa  100  2e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3288  short chain dehydrogenase/reductase family oxidoreductase  33.88 
 
 
262 aa  100  2e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0537  short chain dehydrogenase/reductase family oxidoreductase  33.88 
 
 
262 aa  100  2e-20  Burkholderia mallei SAVP1  Bacteria  normal  0.618923  n/a   
 
 
-
 
NC_008836  BMA10229_A1063  short chain dehydrogenase/reductase family oxidoreductase  33.88 
 
 
262 aa  100  2e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2168  short chain dehydrogenase/reductase family oxidoreductase  33.88 
 
 
262 aa  100  2e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  0.408948  n/a   
 
 
-
 
NC_010814  Glov_1537  short-chain dehydrogenase/reductase SDR  30.2 
 
 
255 aa  99.4  4e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3237  short chain dehydrogenase/reductase family oxidoreductase  33.47 
 
 
262 aa  99  6e-20  Burkholderia pseudomallei 668  Bacteria  normal  0.85457  n/a   
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  34.59 
 
 
260 aa  94.7  1e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1844  short-chain dehydrogenase/reductase SDR  35.12 
 
 
279 aa  95.1  1e-18  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.649512  normal 
 
 
-
 
NC_013739  Cwoe_5549  short-chain dehydrogenase/reductase SDR  31.52 
 
 
269 aa  93.2  4e-18  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2785  short chain dehydrogenase  31.03 
 
 
254 aa  92.8  5e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.73728  normal  0.939169 
 
 
-
 
NC_007510  Bcep18194_A3871  Short-chain dehydrogenase/reductase SDR  32.55 
 
 
263 aa  92.8  5e-18  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3312  short-chain dehydrogenase/reductase SDR  32.67 
 
 
260 aa  90.5  2e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3342  short-chain dehydrogenase/reductase SDR  31.78 
 
 
245 aa  90.5  2e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.468783  n/a   
 
 
-
 
NC_007492  Pfl01_2769  Short-chain dehydrogenase/reductase SDR  35.38 
 
 
252 aa  90.1  3e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_5291  short chain dehydrogenase  30.95 
 
 
260 aa  90.1  3e-17  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  35.75 
 
 
265 aa  89.4  4e-17  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_007493  RSP_1087  short-chain dehydrogenase/reductase family protein  31.03 
 
 
245 aa  89.4  4e-17  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.3765  n/a   
 
 
-
 
NC_009049  Rsph17029_2750  short-chain dehydrogenase/reductase SDR  31.03 
 
 
245 aa  89.4  4e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0379321  normal 
 
 
-
 
NC_008740  Maqu_1905  short-chain dehydrogenase/reductase SDR  33.8 
 
 
271 aa  89.4  5e-17  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0749  short-chain dehydrogenase/reductase SDR  30.77 
 
 
261 aa  89  6e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2941  short-chain dehydrogenase/reductase SDR  30.64 
 
 
245 aa  89  6e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.19024  normal  0.201158 
 
 
-
 
NC_009952  Dshi_0371  short-chain dehydrogenase/reductase SDR  28.76 
 
 
243 aa  89  7e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1339  short chain dehydrogenase/reductase family oxidoreductase  30.88 
 
 
261 aa  87.8  1e-16  Burkholderia thailandensis E264  Bacteria  normal  0.789963  n/a   
 
 
-
 
NC_010681  Bphyt_2637  short chain dehydrogenase  35.56 
 
 
249 aa  87  2e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  0.880192  normal  0.691513 
 
 
-
 
NC_011761  AFE_3014  oxidoreductase, short-chain dehydrogenase/reductase family  30.52 
 
 
257 aa  87  2e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.698047  n/a   
 
 
-
 
NC_008819  NATL1_01071  Short-chain dehydrogenases of various substrate specificities  32.84 
 
 
221 aa  86.7  3e-16  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.315767  normal  0.657338 
 
 
-
 
NC_010084  Bmul_2618  short-chain dehydrogenase/reductase SDR  32 
 
 
260 aa  86.7  3e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1148  short-chain dehydrogenase/reductase SDR  31.22 
 
 
261 aa  86.3  4e-16  Ralstonia pickettii 12J  Bacteria  normal  0.0372396  normal 
 
 
-
 
NC_007948  Bpro_4895  short chain dehydrogenase  31.02 
 
 
258 aa  86.3  4e-16  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000739396  normal 
 
 
-
 
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