More than 300 homologs were found in PanDaTox collection
for query gene Daci_3928 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_3928  acyl-CoA dehydrogenase, putative  100 
 
 
366 aa  721    Delftia acidovorans SPH-1  Bacteria  normal  0.438549  normal  0.0461862 
 
 
-
 
NC_010002  Daci_5825  putative acyl-CoA dehydrogenase  55.87 
 
 
365 aa  328  9e-89  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.803301 
 
 
-
 
NC_010512  Bcenmc03_6334  putative acyl-CoA dehydrogenase  53.69 
 
 
371 aa  322  4e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6745  hypothetical protein  52.84 
 
 
371 aa  316  4e-85  Burkholderia cenocepacia HI2424  Bacteria  normal  0.839762  normal  0.367272 
 
 
-
 
NC_010322  PputGB1_2274  acyl-CoA dehydrogenase  50.43 
 
 
354 aa  316  4e-85  Pseudomonas putida GB-1  Bacteria  normal  0.921595  normal  0.572718 
 
 
-
 
NC_008062  Bcen_6511  hypothetical protein  52.84 
 
 
371 aa  316  4e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0459  hypothetical protein  49.28 
 
 
367 aa  304  2.0000000000000002e-81  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2929  hypothetical protein  50.15 
 
 
355 aa  303  3.0000000000000004e-81  Pseudomonas aeruginosa PA7  Bacteria  normal  0.299925  n/a   
 
 
-
 
NC_007952  Bxe_B1538  putative acyl-CoA dehydrogenase  49.58 
 
 
367 aa  299  6e-80  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_34490  hypothetical protein  51.02 
 
 
355 aa  296  5e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000897326  normal  0.153318 
 
 
-
 
NC_009512  Pput_2095  Acyl-CoA dehydrogenase-like protein  50.14 
 
 
354 aa  295  9e-79  Pseudomonas putida F1  Bacteria  normal  normal  0.528653 
 
 
-
 
NC_002947  PP_3638  acyl-CoA dehydrogenase, putative  50.14 
 
 
354 aa  294  1e-78  Pseudomonas putida KT2440  Bacteria  normal  0.0587866  normal  0.442088 
 
 
-
 
NC_007953  Bxe_C0102  putative acyl-CoA dehydrogenase  48.7 
 
 
367 aa  260  3e-68  Burkholderia xenovorans LB400  Bacteria  normal  0.988493  normal 
 
 
-
 
NC_008532  STER_0700  acyl-CoA dehydrogenase family protein  38.05 
 
 
354 aa  256  4e-67  Streptococcus thermophilus LMD-9  Bacteria  normal  0.564675  n/a   
 
 
-
 
NC_007595  Synpcc7942_B2627  hypothetical protein  39.77 
 
 
353 aa  218  1e-55  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0414836  normal 
 
 
-
 
NC_007520  Tcr_0038  putative acyl-CoA dehydrogenase  26.97 
 
 
360 aa  135  9.999999999999999e-31  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0970  acyl-CoA dehydrogenase domain protein  30.45 
 
 
379 aa  133  3.9999999999999996e-30  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.276335 
 
 
-
 
NC_009720  Xaut_2613  putative acyl-CoA dehydrogenase family protein  30.37 
 
 
373 aa  123  5e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.346291 
 
 
-
 
NC_013422  Hneap_2211  acyl-CoA dehydrogenase domain protein  27.35 
 
 
378 aa  119  7.999999999999999e-26  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2174  putative acyl-CoA dehydrogenase  28.53 
 
 
382 aa  119  7.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3484  acyl-CoA dehydrogenase type 2  32.96 
 
 
358 aa  119  9e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3792  Acyl-CoA dehydrogenase type 2 domain  32.96 
 
 
358 aa  119  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.267616 
 
 
-
 
NC_009485  BBta_5417  putative acyl-CoA dehydrogenase family protein  31.96 
 
 
373 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2837  putative acyl-CoA dehydrogenase  32.05 
 
 
375 aa  117  1.9999999999999998e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.926618 
 
 
-
 
NC_007948  Bpro_4852  acyl-CoA dehydrogenase-like  30.52 
 
 
395 aa  117  3.9999999999999997e-25  Polaromonas sp. JS666  Bacteria  normal  normal  0.150232 
 
 
-
 
NC_011894  Mnod_1706  putative acyl-CoA dehydrogenase  32.5 
 
 
375 aa  116  6e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.087432  n/a   
 
 
-
 
NC_010511  M446_4820  putative acyl-CoA dehydrogenase  33.54 
 
 
375 aa  115  1.0000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.0078002 
 
 
-
 
NC_011757  Mchl_1309  acyl-CoA dehydrogenase domain protein  31.27 
 
 
397 aa  112  1.0000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1150  acyl-CoA dehydrogenase-like protein  29.63 
 
 
397 aa  111  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.428628 
 
 
-
 
NC_007778  RPB_0305  putative acyl-CoA dehydrogenase  29.28 
 
 
376 aa  110  3e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1367 
 
 
-
 
NC_008599  CFF8240_0622  acyl-CoA dehydrogenase  26.55 
 
 
354 aa  108  2e-22  Campylobacter fetus subsp. fetus 82-40  Bacteria  decreased coverage  0.00205931  n/a   
 
 
-
 
NC_010725  Mpop_4667  acyl-CoA dehydrogenase-like protein  29.34 
 
 
396 aa  100  4e-20  Methylobacterium populi BJ001  Bacteria  normal  0.0171462  normal 
 
 
-
 
NC_010725  Mpop_3866  Acyl-CoA dehydrogenase type 2 domain  32.14 
 
 
362 aa  98.2  2e-19  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0222771 
 
 
-
 
NC_013510  Tcur_1452  acyl-CoA dehydrogenase  29.71 
 
 
350 aa  97.1  4e-19  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_009632  SaurJH1_0165  hypothetical protein  23.08 
 
 
344 aa  85.1  0.000000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0160  Acyl-CoA dehydrogenase-like protein  23.08 
 
 
344 aa  85.1  0.000000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_0407  acyl-CoA dehydrogenase domain-containing protein  26.67 
 
 
378 aa  72.8  0.000000000009  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_004578  PSPTO_2739  acyl-CoA dehydrogenase, putative  30.05 
 
 
447 aa  72.4  0.00000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3274  citronelloyl-CoA dehydrogenase, GnyD  31.44 
 
 
387 aa  72  0.00000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_38440  citronelloyl-CoA dehydrogenase, GnyD  31.44 
 
 
387 aa  72  0.00000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.306085 
 
 
-
 
NC_009997  Sbal195_2973  acyl-CoA dehydrogenase domain-containing protein  28.95 
 
 
389 aa  71.2  0.00000000002  Shewanella baltica OS195  Bacteria  normal  0.698816  normal  0.555945 
 
 
-
 
NC_011663  Sbal223_1530  acyl-CoA dehydrogenase domain protein  28.95 
 
 
389 aa  71.2  0.00000000003  Shewanella baltica OS223  Bacteria  normal  0.295941  normal 
 
 
-
 
NC_008541  Arth_1387  butyryl-CoA dehydrogenase  27.23 
 
 
387 aa  71.2  0.00000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3656  isovaleryl-CoA dehydrogenase  29.32 
 
 
387 aa  70.9  0.00000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.179163  normal  0.0293073 
 
 
-
 
NC_009052  Sbal_2828  acyl-CoA dehydrogenase domain-containing protein  28.95 
 
 
389 aa  71.2  0.00000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2082  acyl-CoA dehydrogenase domain protein  27.88 
 
 
376 aa  71.2  0.00000000003  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_008740  Maqu_2121  isovaleryl-CoA dehydrogenase  27.05 
 
 
388 aa  70.5  0.00000000004  Marinobacter aquaeolei VT8  Bacteria  normal  0.274166  n/a   
 
 
-
 
NC_013037  Dfer_3002  acyl-CoA dehydrogenase domain protein  28.82 
 
 
388 aa  70.9  0.00000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  26.61 
 
 
382 aa  70.1  0.00000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2470  isovaleryl-CoA dehydrogenase  29.53 
 
 
387 aa  69.7  0.00000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0293728  normal  0.0125727 
 
 
-
 
NC_009092  Shew_2570  acyl-CoA dehydrogenase domain-containing protein  28.19 
 
 
389 aa  69.3  0.00000000009  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1707  butyryl-CoA dehydrogenase  28.69 
 
 
388 aa  69.3  0.00000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  decreased coverage  0.00000836039  n/a   
 
 
-
 
NC_008686  Pden_0714  butyryl-CoA dehydrogenase  33.68 
 
 
384 aa  68.9  0.0000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0034  acyl-CoA dehydrogenase domain-containing protein  26.48 
 
 
384 aa  68.9  0.0000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.211865  normal 
 
 
-
 
NC_009831  Ssed_1458  acyl-CoA dehydrogenase domain-containing protein  27.89 
 
 
389 aa  68.6  0.0000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.499178 
 
 
-
 
NC_013530  Xcel_2102  acyl-CoA dehydrogenase domain protein  30.92 
 
 
394 aa  68.2  0.0000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.563951  n/a   
 
 
-
 
NC_007958  RPD_0356  isovaleryl-CoA dehydrogenase  28.16 
 
 
392 aa  68.6  0.0000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.969667  decreased coverage  0.00000934354 
 
 
-
 
NC_009665  Shew185_2846  acyl-CoA dehydrogenase domain-containing protein  28.42 
 
 
389 aa  68.2  0.0000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1362  isovaleryl-CoA dehydrogenase  27.96 
 
 
389 aa  68.2  0.0000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.431847 
 
 
-
 
NC_013757  Gobs_1474  acyl-CoA dehydrogenase domain protein  28.45 
 
 
384 aa  68.2  0.0000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
BN001303  ANIA_04688  Isovaleryl-coenzyme A dehydrogenase (EC 1.3.99.10) [Source:UniProtKB/TrEMBL;Acc:Q6T5L6]  27.01 
 
 
431 aa  67.8  0.0000000003  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.480161  normal 
 
 
-
 
NC_013457  VEA_000377  isovaleryl-CoA dehydrogenase  27.14 
 
 
389 aa  67.8  0.0000000003  Vibrio sp. Ex25  Bacteria  normal  0.749145  n/a   
 
 
-
 
NC_008044  TM1040_0732  isovaleryl-CoA dehydrogenase  28.71 
 
 
387 aa  67.8  0.0000000003  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4272  acyl-CoA dehydrogenase domain-containing protein  28.19 
 
 
390 aa  67.8  0.0000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0196507 
 
 
-
 
NC_009439  Pmen_2692  acyl-CoA dehydrogenase domain-containing protein  25.67 
 
 
386 aa  67.4  0.0000000004  Pseudomonas mendocina ymp  Bacteria  normal  0.0824192  normal  0.331355 
 
 
-
 
NC_003910  CPS_1603  isovaleryl-CoA dehydrogenase  27.06 
 
 
389 aa  67.4  0.0000000004  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2576  acyl-CoA dehydrogenase domain protein  30.49 
 
 
378 aa  67.4  0.0000000004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3223  acyl-CoA dehydrogenase domain-containing protein  27.37 
 
 
389 aa  67.4  0.0000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153994 
 
 
-
 
NC_009077  Mjls_1740  acyl-CoA dehydrogenase domain-containing protein  24.8 
 
 
397 aa  67.4  0.0000000004  Mycobacterium sp. JLS  Bacteria  normal  0.0177648  normal 
 
 
-
 
NC_008705  Mkms_1806  acyl-CoA dehydrogenase domain-containing protein  24.8 
 
 
397 aa  67.4  0.0000000004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.580831 
 
 
-
 
NC_008146  Mmcs_1759  acyl-CoA dehydrogenase-like protein  24.8 
 
 
397 aa  67.4  0.0000000004  Mycobacterium sp. MCS  Bacteria  normal  0.218239  n/a   
 
 
-
 
NC_013093  Amir_1570  acyl-CoA dehydrogenase domain protein  31.88 
 
 
383 aa  67  0.0000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0602  putative acyl-CoA dehydrogenase  29.41 
 
 
374 aa  67  0.0000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.0892135  normal  0.143827 
 
 
-
 
NC_010501  PputW619_1812  acyl-CoA dehydrogenase domain-containing protein  27.98 
 
 
387 aa  66.6  0.0000000006  Pseudomonas putida W619  Bacteria  normal  0.0871457  normal  0.415388 
 
 
-
 
NC_009380  Strop_0028  acyl-CoA dehydrogenase domain-containing protein  27.69 
 
 
384 aa  66.6  0.0000000006  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_49560  Acyl-CoA dehydrogenase  28.8 
 
 
393 aa  66.6  0.0000000007  Azotobacter vinelandii DJ  Bacteria  normal  0.531636  n/a   
 
 
-
 
NC_008463  PA14_26700  putative acyl-CoA dehydrogenase  26.7 
 
 
386 aa  66.6  0.0000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.472617  normal 
 
 
-
 
NC_013159  Svir_33630  acyl-CoA dehydrogenase  25.38 
 
 
386 aa  66.2  0.0000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.732719 
 
 
-
 
NC_011992  Dtpsy_0120  acyl-CoA dehydrogenase domain protein  25.89 
 
 
384 aa  66.2  0.0000000008  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2727  isovaleryl-CoA dehydrogenase  27.89 
 
 
389 aa  66.2  0.0000000008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1897  isovaleryl-CoA dehydrogenase  29.1 
 
 
389 aa  65.9  0.000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_2188  acyl-CoA dehydrogenase domain-containing protein  28.65 
 
 
390 aa  65.9  0.000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02412  isovaleryl-CoA dehydrogenase  27.46 
 
 
389 aa  65.9  0.000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.719746  n/a   
 
 
-
 
NC_009656  PSPA7_2265  putative acyl-CoA dehydrogenase  26.56 
 
 
386 aa  65.9  0.000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4050  acyl-CoA dehydrogenase domain-containing protein  27.53 
 
 
383 aa  65.9  0.000000001  Frankia sp. EAN1pec  Bacteria  normal  0.795074  normal  0.300284 
 
 
-
 
NC_009901  Spea_2797  acyl-CoA dehydrogenase domain-containing protein  28.04 
 
 
389 aa  65.9  0.000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0615  acyl-CoA dehydrogenase domain protein  28.11 
 
 
387 aa  65.9  0.000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.210833  normal  0.0397055 
 
 
-
 
NC_007908  Rfer_4169  butyryl-CoA dehydrogenase  25.15 
 
 
383 aa  65.9  0.000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.0614852  n/a   
 
 
-
 
NC_007908  Rfer_4181  butyryl-CoA dehydrogenase  25.15 
 
 
383 aa  65.9  0.000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.0181503  n/a   
 
 
-
 
NC_007951  Bxe_A3574  putative acyl-CoA dehydrogenase  32 
 
 
377 aa  65.9  0.000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2187  acyl-CoA dehydrogenase domain protein  25.15 
 
 
385 aa  65.9  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_30500  butyryl-CoA dehydrogenase  28.22 
 
 
385 aa  65.5  0.000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.262375 
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  31.47 
 
 
383 aa  65.1  0.000000002  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_010086  Bmul_3466  acyl-CoA dehydrogenase domain-containing protein  26.7 
 
 
393 aa  65.1  0.000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.360992  normal 
 
 
-
 
NC_007954  Sden_2245  acyl-CoA dehydrogenase-like protein  27.37 
 
 
389 aa  64.7  0.000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6658  isovaleryl-CoA dehydrogenase  26.98 
 
 
390 aa  65.5  0.000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.53503  normal 
 
 
-
 
NC_007974  Rmet_3858  putative acyl-CoA dehydrogenase  30.13 
 
 
451 aa  65.1  0.000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.99682 
 
 
-
 
NC_012669  Bcav_3850  acyl-CoA dehydrogenase domain protein  30.39 
 
 
388 aa  65.1  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.428744 
 
 
-
 
NC_008321  Shewmr4_2322  isovaleryl-CoA dehydrogenase  28.57 
 
 
389 aa  64.7  0.000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0502  acyl-CoA dehydrogenase domain protein  34.36 
 
 
387 aa  65.5  0.000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
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