11 homologs were found in PanDaTox collection
for query gene Daci_3235 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_3235  hypothetical protein  100 
 
 
154 aa  314  2e-85  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00164083 
 
 
-
 
NC_009512  Pput_3381  hypothetical protein  53.38 
 
 
153 aa  159  2e-38  Pseudomonas putida F1  Bacteria  normal  normal  0.723292 
 
 
-
 
NC_007005  Psyr_2795  hypothetical protein  54.73 
 
 
153 aa  157  6e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.221098  normal  0.176048 
 
 
-
 
NC_009436  Ent638_0799  hypothetical protein  53.19 
 
 
157 aa  155  2e-37  Enterobacter sp. 638  Bacteria  normal  0.656983  normal  0.0124917 
 
 
-
 
NC_010322  PputGB1_3420  hypothetical protein  53.38 
 
 
153 aa  150  8.999999999999999e-36  Pseudomonas putida GB-1  Bacteria  normal  unclonable  8.3914e-17 
 
 
-
 
NC_010159  YpAngola_A2186  phage protein  50.77 
 
 
149 aa  140  8e-33  Yersinia pestis Angola  Bacteria  normal  normal  0.711765 
 
 
-
 
NC_007204  Psyc_1000  phage protein  50.34 
 
 
157 aa  131  3e-30  Psychrobacter arcticus 273-4  Bacteria  normal  hitchhiker  0.0022845 
 
 
-
 
NC_011369  Rleg2_2433  hypothetical protein  45.89 
 
 
154 aa  122  2e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5697  hypothetical protein  43.08 
 
 
152 aa  97.4  7e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.955716  normal 
 
 
-
 
NC_007951  Bxe_A1284  hypothetical protein  42.57 
 
 
136 aa  93.6  8e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.714449  normal  0.0910704 
 
 
-
 
NC_009620  Smed_4855  hypothetical protein  44.33 
 
 
97 aa  85.9  2e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.66713  normal  0.0219213 
 
 
-
 
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