12 homologs were found in PanDaTox collection
for query gene Daci_3218 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_3218  hypothetical protein  100 
 
 
183 aa  374  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  0.450994  normal  0.420496 
 
 
-
 
NC_013132  Cpin_3851  hypothetical protein  54.12 
 
 
285 aa  94.4  9e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0385254  normal  0.135456 
 
 
-
 
NC_010002  Daci_3219  hypothetical protein  50 
 
 
266 aa  87.4  1e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.242742  normal  0.443173 
 
 
-
 
NC_010682  Rpic_2308  hypothetical protein  48.78 
 
 
207 aa  81.6  0.000000000000006  Ralstonia pickettii 12J  Bacteria  normal  0.765754  normal 
 
 
-
 
NC_007951  Bxe_A3055  hypothetical protein  53.73 
 
 
200 aa  75.9  0.0000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.183354  hitchhiker  0.0000166715 
 
 
-
 
NC_012034  Athe_2433  hypothetical protein  46.15 
 
 
558 aa  66.6  0.0000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7128  hypothetical protein  34.58 
 
 
300 aa  53.5  0.000001  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.000315774 
 
 
-
 
NC_010511  M446_4096  hypothetical protein  33.7 
 
 
349 aa  51.2  0.000008  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.934455 
 
 
-
 
NC_006368  lpp2118  hypothetical protein  39.71 
 
 
287 aa  47.4  0.0001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_6989  hypothetical protein  36.84 
 
 
369 aa  46.6  0.0002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6269  hypothetical protein  31.58 
 
 
365 aa  45.8  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.707187  n/a   
 
 
-
 
NC_010623  Bphy_3412  hypothetical protein  25.79 
 
 
307 aa  43.1  0.002  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00223108 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>