6 homologs were found in PanDaTox collection
for query gene Cthe_1764 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_1764  Outer membrane protein-like protein  100 
 
 
362 aa  689    Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00913626  n/a   
 
 
-
 
NC_009012  Cthe_1765  hypothetical protein  28.71 
 
 
383 aa  54.7  0.000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000000291236  n/a   
 
 
-
 
NC_011060  Ppha_0381  type I secretion outer membrane protein, TolC family  20.9 
 
 
445 aa  47  0.0005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0230254  n/a   
 
 
-
 
NC_013422  Hneap_1021  outer membrane efflux protein  23.57 
 
 
528 aa  46.6  0.0006  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0045  outer membrane efflux protein  22.19 
 
 
370 aa  43.9  0.005  Ammonifex degensii KC4  Bacteria  decreased coverage  0.00077566  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1380  outer membrane efflux protein  26.21 
 
 
425 aa  43.5  0.006  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
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