6 homologs were found in PanDaTox collection
for query gene Cpin_3700 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3700  hypothetical protein  100 
 
 
480 aa  970    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.160795  normal  0.238064 
 
 
-
 
NC_013037  Dfer_0168  hypothetical protein  34.03 
 
 
494 aa  186  1.0000000000000001e-45  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3860  O-antigen polymerase  26.51 
 
 
494 aa  107  4e-22  Spirosoma linguale DSM 74  Bacteria  normal  0.182724  normal 
 
 
-
 
NC_013061  Phep_1959  hypothetical protein  25.83 
 
 
481 aa  98.6  2e-19  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0214435  hitchhiker  0.000109824 
 
 
-
 
NC_009012  Cthe_2694  O-antigen polymerase  25.24 
 
 
532 aa  56.2  0.000001  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00327343  n/a   
 
 
-
 
NC_009943  Dole_1436  O-antigen polymerase  25.76 
 
 
404 aa  46.2  0.001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
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