More than 300 homologs were found in PanDaTox collection
for query gene Cpin_2130 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_2130  short-chain dehydrogenase/reductase SDR  100 
 
 
242 aa  489  1e-137  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4279  short-chain dehydrogenase/reductase SDR  68.2 
 
 
241 aa  337  9.999999999999999e-92  Flavobacterium johnsoniae UW101  Bacteria  normal  0.57822  n/a   
 
 
-
 
NC_013205  Aaci_2912  short-chain dehydrogenase/reductase SDR  45.49 
 
 
253 aa  191  1e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00176111  n/a   
 
 
-
 
NC_012791  Vapar_1647  short-chain dehydrogenase/reductase SDR  39.07 
 
 
252 aa  148  6e-35  Variovorax paradoxus S110  Bacteria  normal  0.140341  n/a   
 
 
-
 
NC_010510  Mrad2831_5866  short-chain dehydrogenase/reductase SDR  44.66 
 
 
256 aa  148  9e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.117974  normal  0.033856 
 
 
-
 
NC_011679  PHATR_46707  predicted protein  36.8 
 
 
260 aa  145  4.0000000000000006e-34  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.125621  n/a   
 
 
-
 
NC_004578  PSPTO_4065  oxidoreductase, short-chain dehydrogenase/reductase family  38.5 
 
 
252 aa  142  4e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.372477  n/a   
 
 
-
 
NC_012912  Dd1591_2458  short-chain dehydrogenase/reductase SDR  39.32 
 
 
251 aa  141  9.999999999999999e-33  Dickeya zeae Ech1591  Bacteria  normal  0.315729  n/a   
 
 
-
 
NC_007492  Pfl01_2769  Short-chain dehydrogenase/reductase SDR  37.09 
 
 
252 aa  140  9.999999999999999e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2222  short-chain dehydrogenase/reductase SDR  41.95 
 
 
256 aa  137  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.434402  n/a   
 
 
-
 
NC_009972  Haur_2005  short-chain dehydrogenase/reductase SDR  37.02 
 
 
264 aa  135  8e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2495  short-chain dehydrogenase/reductase SDR  37.09 
 
 
251 aa  134  9.999999999999999e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2654  short-chain dehydrogenase/reductase SDR  40.1 
 
 
241 aa  133  3e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1582  oxidoreductase, short-chain dehydrogenase/reductase family  33.88 
 
 
253 aa  131  7.999999999999999e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.518044  n/a   
 
 
-
 
NC_007492  Pfl01_2715  Short-chain dehydrogenase/reductase SDR  35.16 
 
 
254 aa  130  2.0000000000000002e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.479047 
 
 
-
 
NC_013132  Cpin_6680  short-chain dehydrogenase/reductase SDR  35.04 
 
 
258 aa  129  3e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2956  short-chain dehydrogenase/reductase SDR  38.53 
 
 
252 aa  128  6e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.717982 
 
 
-
 
NC_011368  Rleg2_5083  short-chain dehydrogenase/reductase SDR  37.33 
 
 
250 aa  127  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.130584  normal 
 
 
-
 
NC_010676  Bphyt_4345  short-chain dehydrogenase/reductase SDR  35.32 
 
 
253 aa  125  7e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.120533  normal 
 
 
-
 
NC_003295  RSc3201  oxidoreductase protein  40.66 
 
 
179 aa  124  1e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0457415 
 
 
-
 
NC_013421  Pecwa_3205  short-chain dehydrogenase/reductase SDR  37.8 
 
 
253 aa  122  4e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2258  oxidoreductase  30.45 
 
 
244 aa  122  4e-27  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.188796  normal 
 
 
-
 
NC_010515  Bcenmc03_5071  short-chain dehydrogenase/reductase SDR  37.93 
 
 
252 aa  122  6e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3162  short-chain dehydrogenase/reductase SDR  37.93 
 
 
252 aa  122  6e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5206  short-chain dehydrogenase/reductase SDR  37.93 
 
 
252 aa  122  6e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.0231345 
 
 
-
 
NC_010581  Bind_1016  short-chain dehydrogenase/reductase SDR  34.78 
 
 
257 aa  121  9e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.125705  normal 
 
 
-
 
NC_007413  Ava_1691  Short-chain dehydrogenase/reductase SDR  36.28 
 
 
256 aa  121  9.999999999999999e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4583  short-chain dehydrogenase/reductase SDR  35.59 
 
 
264 aa  121  9.999999999999999e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.427609  normal 
 
 
-
 
NC_013132  Cpin_4321  short-chain dehydrogenase/reductase SDR  36.65 
 
 
260 aa  120  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.488757  normal  0.0305569 
 
 
-
 
NC_012880  Dd703_3459  short-chain dehydrogenase/reductase SDR  39.63 
 
 
247 aa  119  3.9999999999999996e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3678  short-chain dehydrogenase/reductase SDR  32.74 
 
 
241 aa  118  9.999999999999999e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.200672  normal  0.523007 
 
 
-
 
NC_012912  Dd1591_3581  short-chain dehydrogenase/reductase SDR  40.18 
 
 
250 aa  117  9.999999999999999e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4099  short-chain dehydrogenase/reductase SDR  36.97 
 
 
248 aa  112  8.000000000000001e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4882  short-chain dehydrogenase/reductase SDR  37.76 
 
 
247 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.938804 
 
 
-
 
NC_007951  Bxe_A1732  putative short-chain dehydrogenase/reductase SDR  31.58 
 
 
257 aa  107  1e-22  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6716  short-chain dehydrogenase/reductase SDR  34.38 
 
 
247 aa  104  1e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5005  short-chain dehydrogenase/reductase SDR  29.67 
 
 
246 aa  103  2e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.277781  normal  0.0166501 
 
 
-
 
NC_008048  Sala_1081  short-chain dehydrogenase/reductase SDR  35.19 
 
 
250 aa  101  9e-21  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0143  Short-chain dehydrogenase (D-alanine transfer protein)  31.36 
 
 
261 aa  101  1e-20  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2855  short-chain dehydrogenase/reductase SDR  35.61 
 
 
253 aa  101  1e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.243051  normal  0.0981468 
 
 
-
 
NC_007802  Jann_3548  short-chain dehydrogenase/reductase SDR  32.98 
 
 
278 aa  100  3e-20  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2065  short-chain dehydrogenase/reductase SDR  32.61 
 
 
248 aa  99.8  3e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5163  short-chain dehydrogenase/reductase SDR  32.02 
 
 
249 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.898611  normal  0.512081 
 
 
-
 
NC_013132  Cpin_7247  short-chain dehydrogenase/reductase SDR  31.58 
 
 
252 aa  95.9  6e-19  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000475718  normal  0.564028 
 
 
-
 
NC_007794  Saro_1811  short-chain dehydrogenase/reductase SDR  37.5 
 
 
240 aa  94.7  1e-18  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.300255  n/a   
 
 
-
 
NC_013521  Sked_16840  short-chain dehydrogenase, teichoic and lipoteichoic acid D-alanine esterification  31.16 
 
 
256 aa  94.7  1e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0203884 
 
 
-
 
NC_008528  OEOE_0044  D-alanine transfer protein, short-chain dehydrogenase  29.05 
 
 
263 aa  90.5  2e-17  Oenococcus oeni PSU-1  Bacteria  normal  0.170136  n/a   
 
 
-
 
BN001305  ANIA_05556  conserved hypothetical protein  35.45 
 
 
266 aa  87  2e-16  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_008255  CHU_2064  oxidoreductase ( short-chain dehydrogenase)  34.41 
 
 
264 aa  87  2e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.694867  normal  0.0846624 
 
 
-
 
NC_008009  Acid345_2206  short-chain dehydrogenase/reductase SDR  31.16 
 
 
261 aa  87  3e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0587036  normal  0.882414 
 
 
-
 
NC_009720  Xaut_0982  short-chain dehydrogenase/reductase SDR  32.29 
 
 
268 aa  86.7  3e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  31.78 
 
 
360 aa  86.3  4e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  31.69 
 
 
256 aa  85.1  8e-16  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
BN001302  ANIA_10469  oxidoreductase, short-chain dehydrogenase/reductase family (AFU_orthologue; AFUA_1G01330)  30.34 
 
 
264 aa  84.7  0.000000000000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.331607  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  30.69 
 
 
257 aa  84  0.000000000000002  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_0951  short chain dehydrogenase  29.23 
 
 
268 aa  84  0.000000000000002  Psychromonas ingrahamii 37  Bacteria  normal  0.333261  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  32.07 
 
 
273 aa  82.8  0.000000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  27.56 
 
 
344 aa  80.9  0.00000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_02915  serine 3-dehydrogenase  35.68 
 
 
251 aa  79.3  0.00000000000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  31.77 
 
 
263 aa  79  0.00000000000007  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  30 
 
 
263 aa  77.8  0.0000000000001  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2711  short chain dehydrogenase  26.67 
 
 
268 aa  77.4  0.0000000000002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3041  short chain dehydrogenase  26.67 
 
 
268 aa  77  0.0000000000002  Pseudomonas putida F1  Bacteria  normal  0.631041  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  27.88 
 
 
265 aa  77.8  0.0000000000002  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  30 
 
 
321 aa  77.4  0.0000000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2588  short-chain dehydrogenase/reductase SDR  31.79 
 
 
250 aa  77.8  0.0000000000002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2977  short-chain dehydrogenase/reductase SDR  31.15 
 
 
268 aa  77  0.0000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.690113 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  31.41 
 
 
264 aa  77  0.0000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  30.5 
 
 
260 aa  76.6  0.0000000000003  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  28.16 
 
 
264 aa  76.3  0.0000000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  30.21 
 
 
271 aa  75.9  0.0000000000005  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  30.89 
 
 
266 aa  75.9  0.0000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  30.77 
 
 
262 aa  75.9  0.0000000000006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  29.69 
 
 
262 aa  75.9  0.0000000000006  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  30.77 
 
 
262 aa  75.9  0.0000000000006  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  29.69 
 
 
262 aa  75.5  0.0000000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  30.77 
 
 
257 aa  75.1  0.0000000000008  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2182  short-chain dehydrogenase/reductase SDR  31.22 
 
 
239 aa  75.1  0.0000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1939  3-hydroxy acid dehydrogenase  30.48 
 
 
248 aa  74.7  0.000000000001  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  32.78 
 
 
263 aa  74.7  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_007912  Sde_0091  putative serine dehydrogenase  33.52 
 
 
252 aa  74.7  0.000000000001  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0469  short-chain dehydrogenase/reductase SDR  34.39 
 
 
251 aa  74.7  0.000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  29.96 
 
 
263 aa  74.7  0.000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009380  Strop_1599  short-chain dehydrogenase/reductase SDR  33.98 
 
 
260 aa  74.7  0.000000000001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_5052  short-chain dehydrogenase/reductase SDR  34.03 
 
 
246 aa  75.1  0.000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  28.86 
 
 
266 aa  73.6  0.000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3311  short chain dehydrogenase  26.25 
 
 
268 aa  73.9  0.000000000002  Pseudomonas putida W619  Bacteria  normal  0.0701949  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  29.19 
 
 
265 aa  73.9  0.000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  30.65 
 
 
261 aa  73.9  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  32.64 
 
 
265 aa  73.9  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  32.98 
 
 
265 aa  74.3  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  34.78 
 
 
265 aa  73.9  0.000000000002  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  29.33 
 
 
264 aa  74.3  0.000000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  30.37 
 
 
266 aa  73.9  0.000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  31.11 
 
 
264 aa  73.9  0.000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_010577  XfasM23_0107  short-chain dehydrogenase/reductase SDR  32.77 
 
 
271 aa  73.2  0.000000000003  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1178  short-chain dehydrogenase/reductase SDR  31.48 
 
 
239 aa  73.6  0.000000000003  Dickeya zeae Ech1591  Bacteria  normal  0.300792  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  26.86 
 
 
259 aa  73.6  0.000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  30.85 
 
 
270 aa  73.6  0.000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  25.13 
 
 
258 aa  73.6  0.000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
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