10 homologs were found in PanDaTox collection
for query gene Cpin_1208 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_1208  hypothetical protein  100 
 
 
146 aa  286  7e-77  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.000000243299 
 
 
-
 
NC_014230  CA2559_01040  hypothetical protein  36.05 
 
 
136 aa  70.1  0.00000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0667  hypothetical protein  33.54 
 
 
154 aa  67.4  0.00000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  0.158918  normal 
 
 
-
 
NC_008255  CHU_0484  transcription termination factor Rho  32.1 
 
 
155 aa  64.7  0.0000000004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_2045  hypothetical protein  30.46 
 
 
124 aa  59.3  0.00000002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.569205  n/a   
 
 
-
 
NC_009441  Fjoh_4663  hypothetical protein  33.11 
 
 
138 aa  58.5  0.00000003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010830  Aasi_1432  hypothetical protein  32.34 
 
 
161 aa  50.4  0.000008  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    decreased coverage  0.000493238 
 
 
-
 
NC_010831  Cphamn1_0809  hypothetical protein  32.48 
 
 
155 aa  47.8  0.00005  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1218  hypothetical protein  30.67 
 
 
152 aa  47  0.00009  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.757024 
 
 
-
 
NC_013730  Slin_4489  hypothetical protein  32.22 
 
 
169 aa  42  0.003  Spirosoma linguale DSM 74  Bacteria  normal  0.0109941  normal  0.397538 
 
 
-
 
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