76 homologs were found in PanDaTox collection
for query gene Cphy_2193 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_2193  extracellular solute-binding protein  100 
 
 
557 aa  1157    Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1016  extracellular solute-binding protein family 1  27.9 
 
 
585 aa  185  2.0000000000000003e-45  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0426  extracellular solute-binding protein  28.05 
 
 
536 aa  167  5.9999999999999996e-40  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_17890  ABC-type sugar transport system, periplasmic component  26.6 
 
 
527 aa  150  4e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_12990  ABC-type sugar transport system, periplasmic component  26.32 
 
 
511 aa  139  2e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.232436  n/a   
 
 
-
 
NC_013515  Smon_0123  extracellular solute-binding protein family 1  25.9 
 
 
505 aa  115  2.0000000000000002e-24  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_0763  ABC-type sugar transport system, periplasmic component  25.05 
 
 
520 aa  114  6e-24  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.34388  n/a   
 
 
-
 
NC_010001  Cphy_0395  extracellular solute-binding protein  24.17 
 
 
559 aa  113  9e-24  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0487  extracellular solute-binding protein  22.4 
 
 
558 aa  96.7  1e-18  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02830  ABC-type sugar transport system, periplasmic component  23 
 
 
537 aa  86.3  0.000000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.161796  normal 
 
 
-
 
NC_014165  Tbis_1561  sugar ABC transporter periplasmic component-like protein  20.78 
 
 
553 aa  85.9  0.000000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.129044  normal 
 
 
-
 
NC_013093  Amir_1979  extracellular solute-binding protein family 1  22.42 
 
 
542 aa  82.8  0.00000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0058  extracellular solute-binding protein, family 1  22.99 
 
 
551 aa  80.1  0.00000000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.182513 
 
 
-
 
NC_012669  Bcav_3323  extracellular solute-binding protein family 1  21.38 
 
 
552 aa  78.2  0.0000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175879  normal  0.023879 
 
 
-
 
NC_010001  Cphy_1118  extracellular solute-binding protein  23.13 
 
 
541 aa  77.4  0.0000000000006  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000575789  n/a   
 
 
-
 
NC_013521  Sked_33170  carbohydrate-binding protein  21.22 
 
 
551 aa  77  0.0000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0165973  normal 
 
 
-
 
NC_013530  Xcel_0369  extracellular solute-binding protein family 1  22.74 
 
 
556 aa  76.6  0.000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2399  extracellular solute-binding protein family 1  21.26 
 
 
553 aa  76.3  0.000000000001  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000923736  normal 
 
 
-
 
NC_010001  Cphy_0663  ABC-type sugar transport system periplasmic component-like protein  24.42 
 
 
556 aa  74.3  0.000000000005  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000120034  n/a   
 
 
-
 
NC_013172  Bfae_13000  ABC-type sugar transport system, periplasmic component  28.67 
 
 
239 aa  74.3  0.000000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  0.156871  n/a   
 
 
-
 
NC_014151  Cfla_2998  extracellular solute-binding protein family 1  21.22 
 
 
552 aa  73.9  0.000000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.58673  normal  0.432395 
 
 
-
 
NC_012034  Athe_2330  extracellular solute-binding protein family 1  22.33 
 
 
533 aa  72.4  0.00000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2806  extracellular solute-binding protein family 1  22.3 
 
 
556 aa  71.2  0.00000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.636428  normal  0.0208064 
 
 
-
 
NC_011898  Ccel_0145  extracellular solute-binding protein family 1  27.46 
 
 
530 aa  65.9  0.000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0758  extracellular solute-binding protein family 1  27.27 
 
 
443 aa  64.3  0.000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2032  extracellular solute-binding protein family 1  22.75 
 
 
531 aa  63.9  0.000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1870  extracellular solute-binding protein family 1  24.5 
 
 
492 aa  62.8  0.00000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.440802  normal  0.959587 
 
 
-
 
NC_010001  Cphy_3210  putative multiple sugar transport system substrate-binding protein  22.69 
 
 
569 aa  62.4  0.00000002  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000204614  n/a   
 
 
-
 
NC_012034  Athe_2378  extracellular solute-binding protein family 1  22.98 
 
 
486 aa  61.6  0.00000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0279  extracellular solute-binding protein family 1  22.41 
 
 
510 aa  60.8  0.00000006  Meiothermus ruber DSM 1279  Bacteria  normal  0.795384  normal 
 
 
-
 
NC_012034  Athe_2029  ABC-type sugar transport system periplasmic component-like protein  23.63 
 
 
526 aa  60.8  0.00000006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01630  ABC-type sugar transport system, periplasmic component  20.38 
 
 
557 aa  60.8  0.00000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2709  extracellular solute-binding protein family 1  20.98 
 
 
549 aa  58.5  0.0000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_2554  extracellular solute-binding protein family 1  24.33 
 
 
548 aa  57  0.0000009  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00103966  n/a   
 
 
-
 
NC_011899  Hore_20520  extracellular solute-binding protein family 1  26.62 
 
 
417 aa  56.6  0.000001  Halothermothrix orenii H 168  Bacteria  normal  0.561553  n/a   
 
 
-
 
NC_013131  Caci_3821  extracellular solute-binding protein family 1  18.85 
 
 
553 aa  55.5  0.000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.302994  normal  0.0761262 
 
 
-
 
NC_013172  Bfae_00840  ABC-type sugar transport system, periplasmic component  26.97 
 
 
451 aa  54.3  0.000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20480  ABC-type sugar transport system, periplasmic component  20.37 
 
 
559 aa  54.3  0.000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.497394  normal  0.432529 
 
 
-
 
NC_013172  Bfae_29210  ABC-type sugar transport system, periplasmic component  23.08 
 
 
503 aa  53.5  0.000009  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0150  extracellular solute-binding protein family 1  20.94 
 
 
567 aa  53.5  0.000009  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  24.32 
 
 
454 aa  53.5  0.000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  25.1 
 
 
420 aa  53.5  0.000009  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_012034  Athe_0847  extracellular solute-binding protein family 1  22.37 
 
 
556 aa  53.1  0.00001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0931  extracellular solute-binding protein  22.65 
 
 
544 aa  52.8  0.00002  Clostridium phytofermentans ISDg  Bacteria  normal  0.0552135  n/a   
 
 
-
 
NC_011898  Ccel_1025  extracellular solute-binding protein family 1  22.64 
 
 
444 aa  52.4  0.00002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.00000399953  n/a   
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  22.67 
 
 
443 aa  50.8  0.00006  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_012034  Athe_0087  extracellular solute-binding protein  25.75 
 
 
175 aa  50.4  0.00008  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000254979  n/a   
 
 
-
 
NC_010001  Cphy_0341  extracellular solute-binding protein  22.53 
 
 
537 aa  50.1  0.0001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3336  extracellular solute-binding protein family 1  21.83 
 
 
537 aa  50.1  0.0001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2303  extracellular solute-binding protein family 1  22.27 
 
 
480 aa  49.7  0.0001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.316955  n/a   
 
 
-
 
NC_010001  Cphy_2733  extracellular solute-binding protein  20.9 
 
 
533 aa  49.7  0.0001  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.000000105202  n/a   
 
 
-
 
NC_010001  Cphy_3240  extracellular solute-binding protein  25.49 
 
 
522 aa  49.3  0.0002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2662  hypothetical protein  22.4 
 
 
557 aa  49.3  0.0002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2784  extracellular solute-binding protein family 1  21.13 
 
 
573 aa  48.9  0.0002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0200  extracellular solute-binding protein family 1  20.98 
 
 
441 aa  49.7  0.0002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1252  extracellular solute-binding protein family 1  21.74 
 
 
571 aa  48.9  0.0002  Clostridium cellulolyticum H10  Bacteria  normal  0.670255  n/a   
 
 
-
 
NC_011369  Rleg2_1218  extracellular solute-binding protein family 1  29.79 
 
 
444 aa  48.5  0.0003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0291  extracellular solute-binding protein  26.8 
 
 
449 aa  47.8  0.0006  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3052  extracellular solute-binding protein family 1  23.35 
 
 
427 aa  47.4  0.0006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.854825  normal  0.208902 
 
 
-
 
NC_013525  Tter_1101  extracellular solute-binding protein family 1  22.59 
 
 
567 aa  47.4  0.0007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_7516  extracellular solute-binding protein family 1  23.57 
 
 
452 aa  47  0.0008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  25.94 
 
 
422 aa  47  0.0009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_2052  extracellular solute-binding protein family 1  30.36 
 
 
565 aa  47  0.0009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  27.22 
 
 
427 aa  46.6  0.001  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_011886  Achl_3114  extracellular solute-binding protein family 1  21.85 
 
 
510 aa  46.6  0.001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_0698  extracellular solute-binding protein family 1  28.57 
 
 
428 aa  47  0.001  Dickeya dadantii Ech703  Bacteria  normal  0.0317884  n/a   
 
 
-
 
NC_008541  Arth_3316  extracellular solute-binding protein  22.94 
 
 
509 aa  46.6  0.001  Arthrobacter sp. FB24  Bacteria  normal  0.578802  n/a   
 
 
-
 
NC_014165  Tbis_2415  extracellular solute-binding protein family 1  24.43 
 
 
433 aa  45.8  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_3246  extracellular solute-binding protein family 1  22.41 
 
 
443 aa  45.8  0.002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2783  extracellular solute-binding protein family 1  26.8 
 
 
431 aa  45.4  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.185157  normal 
 
 
-
 
NC_012034  Athe_0614  extracellular solute-binding protein family 1  22.07 
 
 
435 aa  44.7  0.004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0996  extracellular solute-binding protein family 1  21.89 
 
 
455 aa  44.7  0.005  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0849  extracellular solute-binding protein family 1  23.81 
 
 
558 aa  44.3  0.006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.206456  n/a   
 
 
-
 
NC_012850  Rleg_1306  extracellular solute-binding protein family 1  29.37 
 
 
445 aa  43.9  0.008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2590  extracellular solute-binding protein family 1  30.53 
 
 
464 aa  43.5  0.009  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  20.73 
 
 
447 aa  43.5  0.01  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
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