12 homologs were found in PanDaTox collection
for query gene Cphy_0850 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0850  hypothetical protein  100 
 
 
428 aa  853    Clostridium phytofermentans ISDg  Bacteria  normal  0.0290611  n/a   
 
 
-
 
NC_011898  Ccel_1547  S-layer domain protein  30.31 
 
 
3320 aa  95.9  1e-18  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2998  S-layer domain-containing protein  38.82 
 
 
926 aa  53.5  0.000008  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2086  beta-xylosidase-like protein  28.93 
 
 
1121 aa  52.4  0.00001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00280414  decreased coverage  0.0000000469917 
 
 
-
 
NC_013216  Dtox_0623  protein of unknown function DUF291  40 
 
 
2205 aa  52  0.00002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.578825  unclonable  0.00000000542423 
 
 
-
 
NC_013216  Dtox_3753  hypothetical protein  34.13 
 
 
340 aa  51.2  0.00003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.655031  normal 
 
 
-
 
NC_008322  Shewmr7_1976  glycoside hydrolase family protein  31.65 
 
 
1121 aa  50.1  0.00007  Shewanella sp. MR-7  Bacteria  unclonable  0.00565193  hitchhiker  0.00420486 
 
 
-
 
NC_008321  Shewmr4_1999  glycoside hydrolase family protein  39.77 
 
 
1121 aa  50.1  0.00008  Shewanella sp. MR-4  Bacteria  unclonable  0.000101187  decreased coverage  0.0000000170847 
 
 
-
 
NC_007912  Sde_3317  Beta-xylosidase-like  37.68 
 
 
1174 aa  48.9  0.0002  Saccharophagus degradans 2-40  Bacteria  unclonable  0.00018095  hitchhiker  0.000000702951 
 
 
-
 
NC_009438  Sputcn32_2047  glycoside hydrolase family protein  34.83 
 
 
1112 aa  48.1  0.0003  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000114958  n/a   
 
 
-
 
NC_011663  Sbal223_2161  glycoside hydrolase family protein  33.08 
 
 
1143 aa  47.4  0.0005  Shewanella baltica OS223  Bacteria  unclonable  0.000526501  hitchhiker  0.0000457644 
 
 
-
 
NC_013093  Amir_1856  hypothetical protein  34.78 
 
 
739 aa  45.4  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0763554  n/a   
 
 
-
 
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