17 homologs were found in PanDaTox collection
for query gene Cmaq_0366 on replicon NC_009954
Organism: Caldivirga maquilingensis IC-167



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009954  Cmaq_0366  exosome complex RNA-binding protein Rrp4  100 
 
 		 240 aa  483  1e-135  Caldivirga maquilingensis IC-167  Archaea  normal  1  normal  1 
 
 
-
 
NC_009073  Pcal_0934  exosome complex RNA-binding protein Rrp4  49.57 
 
 		 235 aa  244  9.999999999999999e-64  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_008701  Pisl_0837  exosome complex RNA-binding protein Rrp4  47.23 
 
 		 231 aa  233  2.0000000000000002e-60  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.628304  normal  0.123763 
 
 
-
 
NC_009376  Pars_1936  exosome complex RNA-binding protein Rrp4  44.92 
 
 		 232 aa  229  4e-59  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  1 
 
 
-
 
NC_010525  Tneu_1382  exosome complex RNA-binding protein Rrp4  48.52 
 
 		 238 aa  225  5.0000000000000005e-58  Thermoproteus neutrophilus V24Sta  Archaea  normal  1  normal  1 
 
 
-
 
NC_008698  Tpen_0582  exosome complex RNA-binding protein Rrp4  45.45 
 
 		 237 aa  192  4e-48  Thermofilum pendens Hrk 5  Archaea  normal  1  n/a   
 
 
-
 
NC_009440  Msed_0076  exosome complex RNA-binding protein Rrp4  43.48 
 
 		 247 aa  175  7e-43  Metallosphaera sedula DSM 5348  Archaea  normal  0.141072  hitchhiker  0.00451109 
 
 
-
 
CP001800  Ssol_1793  K-like, type 1, subgroup  41.67 
 
 		 247 aa  157  1e-37  Sulfolobus solfataricus 98/2  Archaea  normal  0.35215  n/a   
 
 
-
 
NC_008553  Mthe_1363  exosome complex RNA-binding protein Rrp4  41.45 
 
 		 221 aa  152  5e-36  Methanosaeta thermophila PT  Archaea  normal  0.438885  n/a   
 
 
-
 
NC_013926  Aboo_0183  K-like, type 1, subgroup  39.06 
 
 		 230 aa  144  1e-33  Aciduliprofundum boonei T469  Archaea  decreased coverage  0.00000922938  n/a   
 
 
-
 
NC_007355  Mbar_A2505  exosome complex RNA-binding protein Rrp4  36.96 
 
 		 260 aa  139  3e-32  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00658393  normal  0.379662 
 
 
-
 
NC_007955  Mbur_0198  exosome complex RNA-binding protein Rrp4  37 
 
 		 263 aa  138  7.999999999999999e-32  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000947081  n/a   
 
 
-
 
NC_010085  Nmar_0431  exosome complex RNA-binding protein Rrp4  33.48 
 
 		 226 aa  132  6e-30  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0115724 
 
 
-
 
NC_006670  CNA00790  exosome complex exonuclease rrp4, putative  22.97 
 
 		 331 aa  57.8  0.0000002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.937014  n/a   
 
 
-
 
BN001306  ANIA_10406  exosome complex exonuclease Rrp4, putative (AFU_orthologue; AFUA_3G05860)  22.84 
 
 		 390 aa  53.1  0.000004  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.674842  normal  0.0792702 
 
 
-
 
NC_008553  Mthe_0005  exosome complex RNA-binding protein Csl4  37.12 
 
 		 185 aa  50.8  0.00002  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_009044  PICST_31470  predicted protein  22.84 
 
 		 347 aa  49.7  0.00004  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>