267 homologs were found in PanDaTox collection
for query gene Clim_1202 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010803  Clim_1202  large-conductance mechanosensitive channel  100 
 
 
150 aa  300  4.0000000000000003e-81  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00425466  n/a   
 
 
-
 
NC_007514  Cag_0025  large-conductance mechanosensitive channel  62.99 
 
 
155 aa  203  5e-52  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.00280832  n/a   
 
 
-
 
NC_008639  Cpha266_1262  large conductance mechanosensitive channel protein  61.07 
 
 
148 aa  199  1.9999999999999998e-50  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1107  large-conductance mechanosensitive channel  66.89 
 
 
161 aa  197  3e-50  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.545228 
 
 
-
 
NC_011060  Ppha_2788  large-conductance mechanosensitive channel  62.91 
 
 
151 aa  195  2.0000000000000003e-49  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.43697  n/a   
 
 
-
 
NC_013552  DhcVS_1168  large conductance mechanosensitive channel, MscL family  56.77 
 
 
157 aa  189  2e-47  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00000144587  n/a   
 
 
-
 
NC_010644  Emin_0108  large conductance mechanosensitive channel protein  56.67 
 
 
156 aa  182  2.0000000000000003e-45  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.0747555 
 
 
-
 
NC_009455  DehaBAV1_1197  large-conductance mechanosensitive channel  56.21 
 
 
154 aa  181  3e-45  Dehalococcoides sp. BAV1  Bacteria  normal  0.932903  n/a   
 
 
-
 
NC_011769  DvMF_2606  large conductance mechanosensitive channel protein  53.38 
 
 
148 aa  181  3e-45  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011206  Lferr_2860  large conductance mechanosensitive channel protein  52.7 
 
 
151 aa  173  6e-43  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_3260  large conductance mechanosensitive channel protein  52.7 
 
 
151 aa  173  6e-43  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0163  large-conductance mechanosensitive channel  49.02 
 
 
155 aa  171  2.9999999999999996e-42  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0532  large conductance mechanosensitive channel protein  49.35 
 
 
154 aa  166  1e-40  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0167  large-conductance mechanosensitive channel  47.71 
 
 
152 aa  165  2e-40  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1671  large conductance mechanosensitive channel protein  52.7 
 
 
150 aa  164  4e-40  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0394869  n/a   
 
 
-
 
NC_011146  Gbem_0387  large conductance mechanosensitive channel protein  51.7 
 
 
144 aa  162  1.0000000000000001e-39  Geobacter bemidjiensis Bem  Bacteria  normal  0.0376217  n/a   
 
 
-
 
NC_012918  GM21_0381  large conductance mechanosensitive channel protein  51.02 
 
 
144 aa  160  4.0000000000000004e-39  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2794  large-conductance mechanosensitive channel  51.02 
 
 
143 aa  160  7e-39  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0647  large conductance mechanosensitive channel protein  58.97 
 
 
144 aa  157  5e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  0.409185  n/a   
 
 
-
 
NC_010814  Glov_0172  large conductance mechanosensitive channel protein  55.03 
 
 
147 aa  156  1e-37  Geobacter lovleyi SZ  Bacteria  normal  0.505473  n/a   
 
 
-
 
NC_007517  Gmet_2522  large-conductance mechanosensitive channel  47.65 
 
 
145 aa  154  3e-37  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000515588  normal  0.121482 
 
 
-
 
NC_008609  Ppro_1689  large conductance mechanosensitive channel protein  52.35 
 
 
145 aa  148  3e-35  Pelobacter propionicus DSM 2379  Bacteria  normal  0.606027  n/a   
 
 
-
 
NC_011830  Dhaf_2389  large-conductance mechanosensitive channel  48.03 
 
 
150 aa  143  9e-34  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000367491  n/a   
 
 
-
 
NC_007947  Mfla_0647  large conductance mechanosensitive channel protein  61.48 
 
 
139 aa  139  1.9999999999999998e-32  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0109  large conductance mechanosensitive channel protein  50 
 
 
153 aa  137  3.9999999999999997e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_06660  large conductance mechanosensitive channel protein  46.36 
 
 
146 aa  136  7.999999999999999e-32  Cryptobacterium curtum DSM 15641  Bacteria  hitchhiker  0.00600968  normal  0.0734515 
 
 
-
 
NC_008553  Mthe_0747  large conductance mechanosensitive channel protein  52.03 
 
 
146 aa  135  2e-31  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013512  Sdel_0379  large conductance mechanosensitive channel protein  44.9 
 
 
142 aa  133  6.0000000000000005e-31  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0181396  n/a   
 
 
-
 
CP001509  ECD_03141  large-conductance mechanosensitive channel  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0423  large conductance mechanosensitive channel protein  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3586  large-conductance mechanosensitive channel  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli SMS-3-5  Bacteria  normal  0.515412  normal  0.131611 
 
 
-
 
NC_012912  Dd1591_0352  large conductance mechanosensitive channel protein  51.2 
 
 
141 aa  129  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  0.559193  n/a   
 
 
-
 
NC_012892  B21_03092  hypothetical protein  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3774  large-conductance mechanosensitive channel  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli E24377A  Bacteria  normal  0.0382022  n/a   
 
 
-
 
NC_010468  EcolC_0423  large-conductance mechanosensitive channel  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli ATCC 8739  Bacteria  normal  0.465174  hitchhiker  0.0000168159 
 
 
-
 
NC_009800  EcHS_A3484  large-conductance mechanosensitive channel  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli HS  Bacteria  normal  0.175922  n/a   
 
 
-
 
NC_011353  ECH74115_4613  large-conductance mechanosensitive channel  50.41 
 
 
136 aa  129  1.0000000000000001e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000924287  normal 
 
 
-
 
NC_010658  SbBS512_E3677  large-conductance mechanosensitive channel  50.41 
 
 
136 aa  129  2.0000000000000002e-29  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3793  large-conductance mechanosensitive channel  49.23 
 
 
137 aa  128  3e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.832034  n/a   
 
 
-
 
NC_013171  Apre_1288  large conductance mechanosensitive channel protein  42.57 
 
 
136 aa  127  4.0000000000000003e-29  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3972  large-conductance mechanosensitive channel  49.23 
 
 
137 aa  127  7.000000000000001e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0532201  n/a   
 
 
-
 
NC_009436  Ent638_3722  large-conductance mechanosensitive channel  48.46 
 
 
137 aa  126  1.0000000000000001e-28  Enterobacter sp. 638  Bacteria  normal  0.459106  hitchhiker  0.00604869 
 
 
-
 
NC_009667  Oant_0410  large-conductance mechanosensitive channel  49.22 
 
 
137 aa  125  2.0000000000000002e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_4515  large-conductance mechanosensitive channel  52.17 
 
 
138 aa  125  3e-28  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00658327  hitchhiker  0.00000531483 
 
 
-
 
NC_010725  Mpop_2607  large conductance mechanosensitive channel protein  51.56 
 
 
142 aa  124  4.0000000000000003e-28  Methylobacterium populi BJ001  Bacteria  normal  0.526175  normal  0.681771 
 
 
-
 
NC_011757  Mchl_2802  large conductance mechanosensitive channel protein  51.56 
 
 
141 aa  122  1e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.21352  normal 
 
 
-
 
NC_010172  Mext_2579  large conductance mechanosensitive channel protein  51.56 
 
 
141 aa  122  1e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0435  large conductance mechanosensitive channel protein  49.18 
 
 
135 aa  122  2e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0334  large-conductance mechanosensitive channel  47.66 
 
 
138 aa  122  2e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.0803754  n/a   
 
 
-
 
NC_011365  Gdia_3512  large conductance mechanosensitive channel protein  50.43 
 
 
154 aa  122  2e-27  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.178106  normal  0.287508 
 
 
-
 
NC_010465  YPK_0312  large-conductance mechanosensitive channel  44.52 
 
 
134 aa  121  3e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.929299  n/a   
 
 
-
 
NC_010159  YpAngola_A0611  large-conductance mechanosensitive channel  44.52 
 
 
137 aa  121  3e-27  Yersinia pestis Angola  Bacteria  normal  0.0263138  normal  0.217178 
 
 
-
 
NC_009708  YpsIP31758_3886  large-conductance mechanosensitive channel  44.52 
 
 
137 aa  121  3e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00283568  n/a   
 
 
-
 
NC_004310  BR0318  large-conductance mechanosensitive channel  46.88 
 
 
138 aa  120  5e-27  Brucella suis 1330  Bacteria  normal  0.384644  n/a   
 
 
-
 
NC_013730  Slin_6045  large conductance mechanosensitive channel protein  50 
 
 
163 aa  120  7e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2265  large conductance mechanosensitive channel protein  56.25 
 
 
145 aa  120  7e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.898824  normal  0.534464 
 
 
-
 
NC_010001  Cphy_2005  large conductance mechanosensitive channel protein  42.38 
 
 
147 aa  119  9.999999999999999e-27  Clostridium phytofermentans ISDg  Bacteria  normal  0.323319  n/a   
 
 
-
 
NC_009485  BBta_4693  large-conductance mechanosensitive channel  51.22 
 
 
138 aa  119  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0941617 
 
 
-
 
NC_010831  Cphamn1_1750  large conductance mechanosensitive channel protein  43.41 
 
 
133 aa  118  3e-26  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1501  large-conductance mechanosensitive channel  45.53 
 
 
143 aa  116  7.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.917907  n/a   
 
 
-
 
NC_007651  BTH_I2079  large-conductance mechanosensitive channel  45.53 
 
 
143 aa  116  7.999999999999999e-26  Burkholderia thailandensis E264  Bacteria  normal  0.449669  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2000  large-conductance mechanosensitive channel  45.53 
 
 
143 aa  116  7.999999999999999e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3310  large-conductance mechanosensitive channel  45.53 
 
 
143 aa  116  7.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  decreased coverage  0.00104042  n/a   
 
 
-
 
NC_009074  BURPS668_2373  large-conductance mechanosensitive channel  45.53 
 
 
143 aa  116  7.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.140991  n/a   
 
 
-
 
NC_009076  BURPS1106A_2415  large-conductance mechanosensitive channel  45.53 
 
 
143 aa  116  7.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.258205  n/a   
 
 
-
 
NC_009080  BMA10247_1272  large-conductance mechanosensitive channel  45.53 
 
 
143 aa  116  7.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.404097  n/a   
 
 
-
 
NC_007434  BURPS1710b_2521  large-conductance mechanosensitive channel  45.53 
 
 
199 aa  116  9e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.334793  n/a   
 
 
-
 
NC_007925  RPC_2630  large conductance mechanosensitive channel protein  50.41 
 
 
138 aa  116  9.999999999999999e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.425108  normal  0.108359 
 
 
-
 
NC_008309  HS_0037  large-conductance mechanosensitive channel  46.22 
 
 
131 aa  115  9.999999999999999e-26  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1626  large conductance mechanosensitive channel protein  46.34 
 
 
134 aa  115  1.9999999999999998e-25  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000392194  normal 
 
 
-
 
NC_009719  Plav_0712  large-conductance mechanosensitive channel  49.12 
 
 
142 aa  115  3e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.268263  normal 
 
 
-
 
NC_007406  Nwi_1928  large-conductance mechanosensitive channel  46.72 
 
 
139 aa  115  3e-25  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.425698 
 
 
-
 
NC_008577  Shewana3_0520  large-conductance mechanosensitive channel  44.8 
 
 
136 aa  114  3e-25  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_41090  large-conductance mechanosensitive channel  48 
 
 
136 aa  115  3e-25  Azotobacter vinelandii DJ  Bacteria  normal  0.629414  n/a   
 
 
-
 
NC_011666  Msil_3652  large-conductance mechanosensitive channel  46.46 
 
 
134 aa  115  3e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.326365 
 
 
-
 
NC_008321  Shewmr4_0521  large-conductance mechanosensitive channel  44.8 
 
 
136 aa  114  3.9999999999999997e-25  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3511  large-conductance mechanosensitive channel  44.8 
 
 
136 aa  114  3.9999999999999997e-25  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3971  large-conductance mechanosensitive channel  42.97 
 
 
136 aa  113  7.999999999999999e-25  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3789  large-conductance mechanosensitive channel  42.97 
 
 
136 aa  113  7.999999999999999e-25  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3845  large-conductance mechanosensitive channel  42.97 
 
 
136 aa  113  7.999999999999999e-25  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0480  large-conductance mechanosensitive channel  42.97 
 
 
136 aa  113  7.999999999999999e-25  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3679  large-conductance mechanosensitive channel  50 
 
 
137 aa  113  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3333  large-conductance mechanosensitive channel  47.32 
 
 
141 aa  113  8.999999999999998e-25  Dechloromonas aromatica RCB  Bacteria  normal  0.662595  hitchhiker  0.000286923 
 
 
-
 
NC_011205  SeD_A3777  large-conductance mechanosensitive channel  50 
 
 
137 aa  113  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3606  large-conductance mechanosensitive channel  50 
 
 
137 aa  113  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0494582  n/a   
 
 
-
 
NC_010505  Mrad2831_1030  large conductance mechanosensitive channel protein  45.39 
 
 
139 aa  113  8.999999999999998e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.184236  normal  0.070135 
 
 
-
 
NC_011083  SeHA_C3714  large-conductance mechanosensitive channel  50 
 
 
137 aa  113  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.401904 
 
 
-
 
NC_011094  SeSA_A3607  large-conductance mechanosensitive channel  50 
 
 
137 aa  113  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.256612 
 
 
-
 
NC_011831  Cagg_0941  large conductance mechanosensitive channel protein  49.61 
 
 
137 aa  113  1.0000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.954406  normal 
 
 
-
 
NC_011071  Smal_3196  large-conductance mechanosensitive channel  48.28 
 
 
134 aa  112  1.0000000000000001e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.977942  normal 
 
 
-
 
NC_009456  VC0395_0554  large-conductance mechanosensitive channel  45.67 
 
 
136 aa  112  1.0000000000000001e-24  Vibrio cholerae O395  Bacteria  hitchhiker  0.000110723  n/a   
 
 
-
 
NC_008254  Meso_0089  large conductance mechanosensitive channel protein  40.85 
 
 
142 aa  112  1.0000000000000001e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1538  large conductance mechanosensitive channel protein  48.28 
 
 
143 aa  112  1.0000000000000001e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  0.580363  normal  0.302083 
 
 
-
 
NC_009438  Sputcn32_3339  large-conductance mechanosensitive channel  44.88 
 
 
136 aa  112  1.0000000000000001e-24  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4645  large-conductance mechanosensitive channel  46.62 
 
 
139 aa  112  2.0000000000000002e-24  Pseudomonas putida KT2440  Bacteria  normal  normal  0.51742 
 
 
-
 
NC_004347  SO_0522  large-conductance mechanosensitive channel  44.88 
 
 
136 aa  112  2.0000000000000002e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008048  Sala_0992  large-conductance mechanosensitive channel  46.72 
 
 
140 aa  112  2.0000000000000002e-24  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.158656  normal 
 
 
-
 
NC_010322  PputGB1_4639  large-conductance mechanosensitive channel  46.62 
 
 
139 aa  112  2.0000000000000002e-24  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_1381  large conductance mechanosensitive channel protein  46.72 
 
 
132 aa  112  2.0000000000000002e-24  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0292  large-conductance mechanosensitive channel  47.86 
 
 
138 aa  112  2.0000000000000002e-24  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
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