8 homologs were found in PanDaTox collection
for query gene Cla_1043 on replicon NC_012039
Organism: Campylobacter lari RM2100



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012039  Cla_1043  hypothetical protein  100 
 
 
455 aa  911    Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1232  hypothetical protein  42.07 
 
 
465 aa  372  1e-102  Campylobacter jejuni RM1221  Bacteria  normal  0.0131577  n/a   
 
 
-
 
NC_008787  CJJ81176_1107  hypothetical protein  42.29 
 
 
465 aa  370  1e-101  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0733  diguanylate cyclase  24.24 
 
 
514 aa  155  1e-36  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.057951  n/a   
 
 
-
 
NC_009715  CCV52592_0712  diguanylate cyclase  26.95 
 
 
523 aa  155  1e-36  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1617  diguanylate cyclase  24.69 
 
 
514 aa  146  7.0000000000000006e-34  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0076  GGDEF domain-containing protein  26.45 
 
 
524 aa  145  1e-33  Campylobacter concisus 13826  Bacteria  normal  0.790276  n/a   
 
 
-
 
NC_007575  Suden_1570  diguanylate cyclase  21.52 
 
 
516 aa  73.6  0.000000000007  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>