9 homologs were found in PanDaTox collection
for query gene Cla_0199 on replicon NC_012039
Organism: Campylobacter lari RM2100



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012039  Cla_0199  TonB domain protein  100 
 
 
259 aa  520  1e-147  Campylobacter lari RM2100  Bacteria  hitchhiker  0.000163666  n/a   
 
 
-
 
NC_003912  CJE0106  TonB domain-containing protein  41.96 
 
 
259 aa  172  5e-42  Campylobacter jejuni RM1221  Bacteria  unclonable  0.000469036  n/a   
 
 
-
 
NC_009707  JJD26997_0118  TonB domain-containing protein  41.57 
 
 
259 aa  172  5.999999999999999e-42  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000000000554339  n/a   
 
 
-
 
NC_008787  CJJ81176_0146  TonB domain-containing protein  41.96 
 
 
259 aa  166  4e-40  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  unclonable  0.0000000000000823963  n/a   
 
 
-
 
NC_009715  CCV52592_1742  putative periplasmic protein  29 
 
 
276 aa  55.1  0.000001  Campylobacter curvus 525.92  Bacteria  normal  0.0151316  n/a   
 
 
-
 
NC_009714  CHAB381_0691  putative periplasmic protein  24.44 
 
 
288 aa  53.5  0.000004  Campylobacter hominis ATCC BAA-381  Bacteria  decreased coverage  0.00126831  n/a   
 
 
-
 
NC_009802  CCC13826_0921  putative periplasmic protein  29.75 
 
 
315 aa  46.6  0.0004  Campylobacter concisus 13826  Bacteria  normal  0.433081  n/a   
 
 
-
 
NC_008599  CFF8240_1521  periplasmic protein, putative  22.18 
 
 
270 aa  42.7  0.005  Campylobacter fetus subsp. fetus 82-40  Bacteria  decreased coverage  0.0000000345203  n/a   
 
 
-
 
NC_013512  Sdel_0519  hypothetical protein  27.37 
 
 
258 aa  42.7  0.006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
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