94 homologs were found in PanDaTox collection
for query gene Ccur_11360 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_25470  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  82.35 
 
 
425 aa  744    Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_11360  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  100 
 
 
426 aa  884    Cryptobacterium curtum DSM 15641  Bacteria  normal  0.390545  normal  0.8731 
 
 
-
 
NC_013204  Elen_1690  2-hydroxyglutaryl-CoA dehydratase D-component  70.07 
 
 
424 aa  630  1e-179  Eggerthella lenta DSM 2243  Bacteria  normal  0.531982  normal  0.740952 
 
 
-
 
NC_008346  Swol_0412  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  60.1 
 
 
424 aa  549  1e-155  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0389  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  61.41 
 
 
412 aa  530  1e-149  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0254  2-hydroxyglutaryl-CoA dehydratase D-component  53.08 
 
 
423 aa  485  1e-136  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1418  2-hydroxyglutaryl-CoA dehydratase, D-component  50.47 
 
 
436 aa  451  1e-125  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00133287  normal  0.906732 
 
 
-
 
NC_013216  Dtox_0119  2-hydroxyglutaryl-CoA dehydratase D-component  49.41 
 
 
424 aa  445  1.0000000000000001e-124  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000350126  normal  0.0170821 
 
 
-
 
NC_008554  Sfum_3256  2-hydroxyglutaryl-CoA dehydratase, D-component  48.93 
 
 
423 aa  423  1e-117  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  50.12 
 
 
426 aa  423  1e-117  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2944  (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit, putative  48.33 
 
 
431 aa  419  1e-116  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0091  2-hydroxyglutaryl-CoA dehydratase D-component  48.92 
 
 
429 aa  410  1e-113  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1927  2-hydroxyglutaryl-CoA dehydratase D-component  46.67 
 
 
425 aa  407  1.0000000000000001e-112  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.756388  n/a   
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  45.69 
 
 
426 aa  406  1.0000000000000001e-112  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0863  2-hydroxyglutaryl-CoA dehydratase, D-component  43.63 
 
 
426 aa  379  1e-104  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0455624  normal 
 
 
-
 
NC_013512  Sdel_2024  2-hydroxyglutaryl-CoA dehydratase D-component  41.53 
 
 
439 aa  366  1e-100  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  42.36 
 
 
373 aa  300  3e-80  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  42.36 
 
 
373 aa  300  3e-80  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  42.09 
 
 
373 aa  299  6e-80  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_009975  MmarC6_0607  2-hydroxyglutaryl-CoA dehydratase D-component  41.96 
 
 
373 aa  297  3e-79  Methanococcus maripaludis C6  Archaea  normal  0.422107  n/a   
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  42.23 
 
 
373 aa  296  5e-79  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  41.14 
 
 
373 aa  296  6e-79  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  41.3 
 
 
373 aa  295  7e-79  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  40.76 
 
 
372 aa  285  8e-76  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  41.03 
 
 
401 aa  278  9e-74  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_002939  GSU2519  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  41.8 
 
 
387 aa  276  7e-73  Geobacter sulfurreducens PCA  Bacteria  normal  0.321633  n/a   
 
 
-
 
NC_011832  Mpal_1311  2-hydroxyglutaryl-CoA dehydratase D-component  40.79 
 
 
388 aa  271  1e-71  Methanosphaerula palustris E1-9c  Archaea  normal  0.522959  normal 
 
 
-
 
NC_014150  Bmur_0617  2-hydroxyglutaryl-CoA dehydratase D-component  40.11 
 
 
384 aa  265  8.999999999999999e-70  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1278  2-hydroxyglutaryl-CoA dehydratase, D-component  37.76 
 
 
385 aa  265  2e-69  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_1623  2-hydroxyglutaryl-CoA dehydratase D-component  40.37 
 
 
373 aa  264  2e-69  Methanococcus vannielii SB  Archaea  decreased coverage  0.000208392  n/a   
 
 
-
 
NC_007644  Moth_1446  2-hydroxyglutaryl-CoA dehydratase, D-component  36.25 
 
 
381 aa  261  1e-68  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.629308  normal  0.054659 
 
 
-
 
NC_013216  Dtox_1465  2-hydroxyglutaryl-CoA dehydratase D-component  37.7 
 
 
369 aa  258  2e-67  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1694  2-hydroxyglutaryl-CoA dehydratase D-component  39.12 
 
 
382 aa  255  1.0000000000000001e-66  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_25330  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  37.26 
 
 
390 aa  252  9.000000000000001e-66  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.8257 
 
 
-
 
NC_011830  Dhaf_3912  2-hydroxyglutaryl-CoA dehydratase D-component  37.74 
 
 
384 aa  250  3e-65  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0706  2-hydroxyglutaryl-CoA dehydratase, D-component  40.27 
 
 
380 aa  249  4e-65  Desulfovibrio vulgaris DP4  Bacteria  normal  0.255737  normal  0.505258 
 
 
-
 
NC_008554  Sfum_3161  2-hydroxyglutaryl-CoA dehydratase, D-component  37.43 
 
 
382 aa  244  1.9999999999999999e-63  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009802  CCC13826_1134  UDP-MurNac-pentapeptide presynthetase  37.67 
 
 
385 aa  241  2e-62  Campylobacter concisus 13826  Bacteria  normal  0.207036  n/a   
 
 
-
 
NC_009715  CCV52592_0873  2-hydroxyglutaryl-CoA dehydratase, D-component  37.33 
 
 
385 aa  240  2.9999999999999997e-62  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0545  2-hydroxyglutaryl-CoA dehydratase D-component  36.51 
 
 
379 aa  239  5.999999999999999e-62  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4937  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  38.92 
 
 
383 aa  236  8e-61  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0866  2-hydroxyglutaryl-CoA dehydratase, D-component  34.27 
 
 
383 aa  236  8e-61  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.327302  normal 
 
 
-
 
NC_010718  Nther_0828  2-hydroxyglutaryl-CoA dehydratase D-component  35.7 
 
 
393 aa  236  8e-61  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.0000331904 
 
 
-
 
CP001509  ECD_04204  predicted 2-hydroxyglutaryl-CoA dehydratase  38.65 
 
 
383 aa  235  1.0000000000000001e-60  Escherichia coli BL21(DE3)  Bacteria  normal  0.0605066  n/a   
 
 
-
 
NC_012892  B21_04167  hypothetical protein  38.65 
 
 
383 aa  235  1.0000000000000001e-60  Escherichia coli BL21  Bacteria  normal  0.0394396  n/a   
 
 
-
 
NC_010498  EcSMS35_4882  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  38.48 
 
 
383 aa  235  1.0000000000000001e-60  Escherichia coli SMS-3-5  Bacteria  normal  0.30993  normal  0.992487 
 
 
-
 
CP001637  EcDH1_3660  2-hydroxyglutaryl-CoA dehydratase D-component  38.65 
 
 
383 aa  235  1.0000000000000001e-60  Escherichia coli DH1  Bacteria  normal  0.814301  n/a   
 
 
-
 
NC_009800  EcHS_A4563  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  38.38 
 
 
383 aa  233  3e-60  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0410  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  34.99 
 
 
378 aa  233  4.0000000000000004e-60  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.732282  n/a   
 
 
-
 
NC_011353  ECH74115_5849  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  38.65 
 
 
383 aa  233  6e-60  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.981774 
 
 
-
 
NC_013165  Shel_26180  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  36.1 
 
 
384 aa  232  1e-59  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0392  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  37.11 
 
 
392 aa  231  2e-59  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3728  2-hydroxyglutaryl-CoA dehydratase D-component  38.48 
 
 
383 aa  230  3e-59  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0986  2-hydroxyglutaryl-CoA dehydratase D-component  34.62 
 
 
379 aa  223  4.9999999999999996e-57  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.345407 
 
 
-
 
NC_008346  Swol_0427  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  36.49 
 
 
382 aa  216  4e-55  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2825  2-hydroxyglutaryl-CoA dehydratase D-component  36.16 
 
 
368 aa  210  5e-53  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0785  2-hydroxyglutaryl-CoA dehydratase, D-component  36.26 
 
 
420 aa  191  2e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.237879  normal 
 
 
-
 
NC_007575  Suden_0273  2-hydroxyglutaryl-CoA dehydratase, D-component  28.83 
 
 
422 aa  163  6e-39  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1147  2-hydroxyglutaryl-CoA dehydratase D-component  26.49 
 
 
393 aa  139  6e-32  Methanosphaerula palustris E1-9c  Archaea  normal  0.132933  normal 
 
 
-
 
NC_009483  Gura_3877  2-hydroxyglutaryl-CoA dehydratase, D-component  29.41 
 
 
395 aa  125  2e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1101  2-hydroxyglutaryl-CoA dehydratase D-component  27.64 
 
 
379 aa  123  6e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1278  2-hydroxyglutaryl-CoA dehydratase, D-component  25.13 
 
 
413 aa  116  7.999999999999999e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2055  2-hydroxyglutaryl-CoA dehydratase, D-component  24.87 
 
 
376 aa  113  7.000000000000001e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.574959  normal  0.736744 
 
 
-
 
NC_009943  Dole_2769  2-hydroxyglutaryl-CoA dehydratase D-component  28.23 
 
 
379 aa  110  4.0000000000000004e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2774  2-hydroxyglutaryl-CoA dehydratase D-component  23.8 
 
 
376 aa  100  6e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1708  2-hydroxyglutaryl-CoA dehydratase D-component  25.91 
 
 
322 aa  87.8  4e-16  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0891  2-hydroxyglutaryl-CoA dehydratase D-component  26.4 
 
 
373 aa  80.5  0.00000000000005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1747  2-hydroxyglutaryl-CoA dehydratase D-component  23.85 
 
 
339 aa  79.7  0.00000000000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1772  2-hydroxyglutaryl-CoA dehydratase D-component  25.63 
 
 
358 aa  78.6  0.0000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.39587 
 
 
-
 
NC_011899  Hore_16080  2-hydroxyglutaryl-CoA dehydratase D-component  25.27 
 
 
426 aa  77  0.0000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_16090  2-hydroxyglutaryl-CoA dehydratase D-component  24.58 
 
 
355 aa  77  0.0000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1686  2-hydroxyglutaryl-CoA dehydratase D-component  23.56 
 
 
370 aa  74.3  0.000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0274681  n/a   
 
 
-
 
NC_011830  Dhaf_3454  2-hydroxyglutaryl-CoA dehydratase D-component  25.68 
 
 
386 aa  73.6  0.000000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1007  2-hydroxyglutaryl-CoA dehydratase, D-component  23.08 
 
 
349 aa  72.4  0.00000000002  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.0000000530359  hitchhiker  0.000167288 
 
 
-
 
NC_007644  Moth_1006  2-hydroxyglutaryl-CoA dehydratase, D-component  23.66 
 
 
421 aa  68.9  0.0000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0695891  hitchhiker  0.000177823 
 
 
-
 
NC_011662  Tmz1t_2951  benzoyl-CoA reductase, subunit C  21.98 
 
 
386 aa  66.6  0.0000000007  Thauera sp. MZ1T  Bacteria  normal  0.689086  n/a   
 
 
-
 
NC_007925  RPC_1029  benzoyl-CoA reductase, subunit C  24.19 
 
 
394 aa  65.9  0.000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0724  benzoyl-CoA reductase, subunit C  23.85 
 
 
394 aa  64.3  0.000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.377082  n/a   
 
 
-
 
NC_010718  Nther_1771  2-hydroxyglutaryl-CoA dehydratase D-component  24.17 
 
 
419 aa  62.4  0.00000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.433973 
 
 
-
 
NC_007958  RPD_1538  benzoyl-CoA reductase, subunit C  23.24 
 
 
394 aa  58.2  0.0000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.130058  normal 
 
 
-
 
NC_011661  Dtur_1746  2-hydroxyglutaryl-CoA dehydratase D-component  26.42 
 
 
408 aa  55.5  0.000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0930  2-hydroxyglutaryl-CoA dehydratase D-component  24.06 
 
 
377 aa  52.4  0.00002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0187897  n/a   
 
 
-
 
NC_011832  Mpal_1135  2-hydroxyglutaryl-CoA dehydratase D-component  22.88 
 
 
494 aa  51.2  0.00004  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.207631 
 
 
-
 
NC_012034  Athe_0199  2-hydroxyglutaryl-CoA dehydratase D-component  20.6 
 
 
416 aa  50.1  0.00007  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000602439  n/a   
 
 
-
 
NC_010320  Teth514_1898  putative CoA-substrate-specific enzyme activase  32.03 
 
 
539 aa  50.1  0.00008  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3878  2-hydroxyglutaryl-CoA dehydratase, D-component  23.08 
 
 
472 aa  50.1  0.00009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1028  benzoyl-CoA reductase, subunit B  22.67 
 
 
436 aa  47.8  0.0004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_011662  Tmz1t_2950  benzoyl-CoA reductase, subunit B  22.17 
 
 
432 aa  47  0.0007  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1146  2-hydroxyglutaryl-CoA dehydratase D-component  23.31 
 
 
501 aa  45.8  0.001  Methanosphaerula palustris E1-9c  Archaea  normal  0.114062  normal 
 
 
-
 
NC_007958  RPD_1537  benzoyl-CoA reductase, subunit B  23.46 
 
 
436 aa  45.4  0.002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0725  benzoyl-CoA reductase, subunit B  22.74 
 
 
436 aa  44.7  0.004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0743165  n/a   
 
 
-
 
NC_011146  Gbem_1413  2-hydroxyglutaryl-CoA dehydratase D-component  25.95 
 
 
415 aa  43.5  0.007  Geobacter bemidjiensis Bem  Bacteria  normal  0.657921  n/a   
 
 
-
 
NC_010814  Glov_2400  2-hydroxyglutaryl-CoA dehydratase D-component  23.01 
 
 
425 aa  43.5  0.007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1137  2-hydroxyglutaryl-CoA dehydratase D-component  23.18 
 
 
494 aa  43.1  0.01  Methanosphaerula palustris E1-9c  Archaea  normal  0.417243  normal 
 
 
-
 
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