63 homologs were found in PanDaTox collection
for query gene Ccel_1252 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_1252  extracellular solute-binding protein family 1  100 
 
 
571 aa  1172    Clostridium cellulolyticum H10  Bacteria  normal  0.670255  n/a   
 
 
-
 
NC_013411  GYMC61_2709  extracellular solute-binding protein family 1  31.91 
 
 
549 aa  219  2e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_1101  extracellular solute-binding protein family 1  29.84 
 
 
567 aa  97.1  8e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0931  extracellular solute-binding protein  30.45 
 
 
544 aa  87  9e-16  Clostridium phytofermentans ISDg  Bacteria  normal  0.0552135  n/a   
 
 
-
 
NC_008541  Arth_3316  extracellular solute-binding protein  29.91 
 
 
509 aa  84.3  0.000000000000005  Arthrobacter sp. FB24  Bacteria  normal  0.578802  n/a   
 
 
-
 
NC_012669  Bcav_1870  extracellular solute-binding protein family 1  25.78 
 
 
492 aa  84  0.000000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.440802  normal  0.959587 
 
 
-
 
NC_011886  Achl_3114  extracellular solute-binding protein family 1  29.29 
 
 
510 aa  83.6  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_2733  extracellular solute-binding protein  26.42 
 
 
533 aa  82  0.00000000000003  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.000000105202  n/a   
 
 
-
 
NC_013946  Mrub_0279  extracellular solute-binding protein family 1  27.88 
 
 
510 aa  81.6  0.00000000000004  Meiothermus ruber DSM 1279  Bacteria  normal  0.795384  normal 
 
 
-
 
NC_010001  Cphy_0341  extracellular solute-binding protein  29.91 
 
 
537 aa  76.3  0.000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0145  extracellular solute-binding protein family 1  23.57 
 
 
530 aa  76.3  0.000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7516  extracellular solute-binding protein family 1  31.65 
 
 
452 aa  76.6  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0123  extracellular solute-binding protein family 1  28.31 
 
 
505 aa  74.7  0.000000000004  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_2330  extracellular solute-binding protein family 1  24.54 
 
 
533 aa  74.7  0.000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1016  extracellular solute-binding protein family 1  26.82 
 
 
585 aa  73.2  0.00000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0698  extracellular solute-binding protein family 1  32.05 
 
 
428 aa  71.2  0.00000000005  Dickeya dadantii Ech703  Bacteria  normal  0.0317884  n/a   
 
 
-
 
NC_013947  Snas_0758  extracellular solute-binding protein family 1  32.06 
 
 
443 aa  70.9  0.00000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A4016  carbohydrate ABC transporter periplasmic-binding protein  30.07 
 
 
437 aa  69.7  0.0000000001  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29210  ABC-type sugar transport system, periplasmic component  24 
 
 
503 aa  70.1  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3709  extracellular solute-binding protein  30.07 
 
 
437 aa  69.7  0.0000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3575  carbohydrate ABC transporter periplasmic-binding protein  30.07 
 
 
437 aa  69.7  0.0000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3240  extracellular solute-binding protein  20.59 
 
 
522 aa  68.9  0.0000000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0482  extracellular solute-binding protein  30.71 
 
 
443 aa  68.9  0.0000000002  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00268905  n/a   
 
 
-
 
NC_012034  Athe_2091  extracellular solute-binding protein family 1  27.23 
 
 
522 aa  67.8  0.0000000006  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00542537  n/a   
 
 
-
 
NC_012034  Athe_2378  extracellular solute-binding protein family 1  25.2 
 
 
486 aa  66.6  0.000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2094  extracellular solute-binding protein family 1  28.82 
 
 
441 aa  64.7  0.000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000152964 
 
 
-
 
NC_010001  Cphy_0395  extracellular solute-binding protein  22.97 
 
 
559 aa  65.1  0.000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  24.92 
 
 
424 aa  64.3  0.000000005  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_010001  Cphy_0775  extracellular solute-binding protein  20.43 
 
 
523 aa  63.2  0.00000001  Clostridium phytofermentans ISDg  Bacteria  normal  0.062981  n/a   
 
 
-
 
NC_008541  Arth_0426  extracellular solute-binding protein  25.4 
 
 
536 aa  62  0.00000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1118  extracellular solute-binding protein  25.97 
 
 
541 aa  61.2  0.00000005  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000575789  n/a   
 
 
-
 
NC_008527  LACR_0763  ABC-type sugar transport system, periplasmic component  26.77 
 
 
520 aa  58.5  0.0000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.34388  n/a   
 
 
-
 
NC_012034  Athe_2032  extracellular solute-binding protein family 1  24.14 
 
 
531 aa  58.9  0.0000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0487  extracellular solute-binding protein  27.92 
 
 
558 aa  57.4  0.0000007  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1174  extracellular solute-binding protein  25.51 
 
 
455 aa  56.6  0.000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  0.401546 
 
 
-
 
NC_013521  Sked_02830  ABC-type sugar transport system, periplasmic component  30.59 
 
 
537 aa  53.9  0.000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.161796  normal 
 
 
-
 
NC_010001  Cphy_2193  extracellular solute-binding protein  21.01 
 
 
557 aa  50.8  0.00006  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  22.12 
 
 
455 aa  49.7  0.0001  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_011898  Ccel_0150  extracellular solute-binding protein family 1  22.1 
 
 
567 aa  49.3  0.0002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3336  extracellular solute-binding protein family 1  19.42 
 
 
537 aa  48.9  0.0003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1609  ABC-type sugar transport system periplasmic component  23.21 
 
 
557 aa  48.1  0.0005  Thermobifida fusca YX  Bacteria  normal  0.051709  n/a   
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  24.2 
 
 
439 aa  47.4  0.0006  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3388  extracellular solute-binding protein family 1  23.17 
 
 
547 aa  47.4  0.0007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2784  extracellular solute-binding protein family 1  22.45 
 
 
573 aa  46.6  0.001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2806  extracellular solute-binding protein family 1  23.6 
 
 
556 aa  45.8  0.002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.636428  normal  0.0208064 
 
 
-
 
NC_013595  Sros_1494  ABC-type sugar transport system periplasmic component-like protein  23.91 
 
 
438 aa  45.4  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  26.59 
 
 
443 aa  45.4  0.003  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  24.83 
 
 
439 aa  45.1  0.003  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_011898  Ccel_1133  extracellular solute-binding protein family 1  25.22 
 
 
451 aa  45.1  0.003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0998  extracellular solute-binding protein family 1  25.89 
 
 
451 aa  45.4  0.003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0948  extracellular solute-binding protein family 1  23.74 
 
 
525 aa  45.1  0.003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000245196  n/a   
 
 
-
 
NC_010001  Cphy_0494  extracellular solute-binding protein  27.27 
 
 
465 aa  45.4  0.003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0847  extracellular solute-binding protein family 1  21.27 
 
 
556 aa  44.7  0.004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  21.97 
 
 
422 aa  44.3  0.005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0208  extracellular solute-binding protein family 1  23.47 
 
 
454 aa  44.7  0.005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  25.4 
 
 
419 aa  44.7  0.005  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  24.18 
 
 
419 aa  44.3  0.005  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1580  ABC-type sugar transport system, periplasmic component  24.1 
 
 
544 aa  44.7  0.005  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1293  ABC-type sugar transport system periplasmic component-like protein  23.29 
 
 
564 aa  44.3  0.006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.719816 
 
 
-
 
NC_014211  Ndas_5565  extracellular solute-binding protein family 1  24.05 
 
 
552 aa  43.9  0.007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.379464  normal  0.358408 
 
 
-
 
NC_012669  Bcav_0058  extracellular solute-binding protein, family 1  26.32 
 
 
551 aa  43.9  0.009  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.182513 
 
 
-
 
NC_009523  RoseRS_0803  extracellular solute-binding protein  23.36 
 
 
435 aa  43.9  0.009  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_17890  ABC-type sugar transport system, periplasmic component  23.05 
 
 
527 aa  43.5  0.01  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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