13 homologs were found in PanDaTox collection
for query gene Cag_1890 on replicon NC_007514
Organism: Chlorobium chlorochromatii CaD3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007514  Cag_1890  hypothetical protein  100 
 
 
78 aa  158  2e-38  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0624  hypothetical protein  54.93 
 
 
85 aa  87  8e-17  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0758  putative transmembrane anti-sigma factor  52.05 
 
 
78 aa  78.2  0.00000000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.163321 
 
 
-
 
NC_011060  Ppha_2153  hypothetical protein  51.39 
 
 
85 aa  78.6  0.00000000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1703  putative transmembrane anti-sigma factor  49.32 
 
 
75 aa  71.6  0.000000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.864451  hitchhiker  0.000407329 
 
 
-
 
NC_010803  Clim_0764  putative transmembrane anti-sigma factor  45.71 
 
 
88 aa  65.9  0.0000000002  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0867  putative transmembrane anti-sigma factor  42.86 
 
 
77 aa  61.6  0.000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.71952  n/a   
 
 
-
 
NC_010424  Daud_2126  putative transmembrane anti-sigma factor  43.14 
 
 
356 aa  47  0.00009  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2457  transmembrane transcriptional regulator (anti-sigma factor)  36.76 
 
 
320 aa  43.9  0.0008  Burkholderia xenovorans LB400  Bacteria  normal  0.339565  normal  0.221442 
 
 
-
 
NC_011369  Rleg2_3435  putative transmembrane anti-sigma factor  26.47 
 
 
265 aa  43.5  0.001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1785  putative transmembrane anti-sigma factor  36.76 
 
 
311 aa  42.4  0.002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.1097  normal  0.379746 
 
 
-
 
NC_010622  Bphy_0910  putative transmembrane anti-sigma factor  35.29 
 
 
322 aa  42  0.003  Burkholderia phymatum STM815  Bacteria  normal  normal  0.194981 
 
 
-
 
NC_007964  Nham_2675  putative transmembrane transcriptional regulator (anti-sigma factor)  28.36 
 
 
253 aa  40  0.01  Nitrobacter hamburgensis X14  Bacteria  normal  0.178183  n/a   
 
 
-
 
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