184 homologs were found in PanDaTox collection
for query gene Cag_1126 on replicon NC_007514
Organism: Chlorobium chlorochromatii CaD3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007514  Cag_1126  hypothetical protein  100 
 
 
135 aa  275  2e-73  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0871  methylmalonyl-CoA epimerase  65.67 
 
 
135 aa  175  2e-43  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1167  methylmalonyl-CoA epimerase  63.91 
 
 
135 aa  171  3.9999999999999995e-42  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.217696  n/a   
 
 
-
 
NC_011060  Ppha_1170  methylmalonyl-CoA epimerase  63.16 
 
 
135 aa  170  5e-42  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.107967  n/a   
 
 
-
 
NC_011059  Paes_0877  methylmalonyl-CoA epimerase  56.39 
 
 
134 aa  153  8e-37  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.157449  normal  0.0450617 
 
 
-
 
NC_010831  Cphamn1_1175  methylmalonyl-CoA epimerase  56.39 
 
 
134 aa  153  9e-37  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.0281042 
 
 
-
 
NC_007512  Plut_1289  lactoylglutathione lyase  54.48 
 
 
137 aa  151  2.9999999999999998e-36  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU3303  methylmalonyl-CoA epimerase  46.62 
 
 
134 aa  111  3e-24  Geobacter sulfurreducens PCA  Bacteria  hitchhiker  0.000981467  n/a   
 
 
-
 
NC_014230  CA2559_03285  Lactoylglutathione lyase and related lyase  47.37 
 
 
135 aa  107  4.0000000000000004e-23  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.275732  n/a   
 
 
-
 
NC_009483  Gura_0655  glyoxalase/bleomycin resistance protein/dioxygenase  43.61 
 
 
134 aa  106  1e-22  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000000195436  n/a   
 
 
-
 
NC_007517  Gmet_3253  methylmalonyl-CoA epimerase  45.11 
 
 
134 aa  105  2e-22  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000018375  hitchhiker  3.27573e-17 
 
 
-
 
NC_008609  Ppro_0522  glyoxalase/bleomycin resistance protein/dioxygenase  43.61 
 
 
134 aa  105  2e-22  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0000000014865  n/a   
 
 
-
 
NC_012793  GWCH70_2285  methylmalonyl-CoA epimerase  41.04 
 
 
140 aa  104  3e-22  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.0000102737  n/a   
 
 
-
 
NC_010320  Teth514_1852  glyoxalase/bleomycin resistance protein/dioxygenase  40.6 
 
 
133 aa  105  3e-22  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0290  methylmalonyl-CoA epimerase  40.91 
 
 
133 aa  104  4e-22  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0306  methylmalonyl-CoA epimerase  40.74 
 
 
141 aa  103  6e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010085  Nmar_0953  glyoxalase/bleomycin resistance protein/dioxygenase  44.8 
 
 
131 aa  103  8e-22  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0254493 
 
 
-
 
NC_010571  Oter_3306  methylmalonyl-CoA epimerase  43.38 
 
 
135 aa  103  9e-22  Opitutus terrae PB90-1  Bacteria  normal  0.369567  normal 
 
 
-
 
NC_011146  Gbem_0558  methylmalonyl-CoA epimerase  42.11 
 
 
137 aa  102  2e-21  Geobacter bemidjiensis Bem  Bacteria  unclonable  0.000000000977172  n/a   
 
 
-
 
NC_010718  Nther_1488  methylmalonyl-CoA epimerase  40.74 
 
 
134 aa  102  2e-21  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.383789  normal  0.131397 
 
 
-
 
NC_013926  Aboo_1361  methylmalonyl-CoA epimerase  42.96 
 
 
129 aa  101  4e-21  Aciduliprofundum boonei T469  Archaea  unclonable  2.7651e-17  n/a   
 
 
-
 
NC_009943  Dole_0080  glyoxalase/bleomycin resistance protein/dioxygenase  39.26 
 
 
135 aa  100  7e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0425619  n/a   
 
 
-
 
NC_012918  GM21_0571  methylmalonyl-CoA epimerase  42.11 
 
 
137 aa  99.8  1e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.82853e-18 
 
 
-
 
NC_008609  Ppro_1282  glyoxalase/bleomycin resistance protein/dioxygenase  41.04 
 
 
134 aa  99.4  1e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0659  glyoxalase/bleomycin resistance protein/dioxygenase  44.03 
 
 
134 aa  99.8  1e-20  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.00502246  n/a   
 
 
-
 
NC_013730  Slin_5823  methylmalonyl-CoA epimerase  42.86 
 
 
135 aa  99.4  2e-20  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.609352 
 
 
-
 
NC_008009  Acid345_2364  methylmalonyl-CoA epimerase  44.7 
 
 
135 aa  98.6  3e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1316  glyoxalase/bleomycin resistance protein/dioxygenase  43.08 
 
 
135 aa  98.2  3e-20  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3891  methylmalonyl-CoA epimerase  40.71 
 
 
145 aa  97.8  5e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  0.394666  n/a   
 
 
-
 
NC_008554  Sfum_0455  glyoxalase/bleomycin resistance protein/dioxygenase  39.55 
 
 
134 aa  96.7  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.571993 
 
 
-
 
NC_009616  Tmel_0586  glyoxalase/bleomycin resistance protein/dioxygenase  41.09 
 
 
135 aa  96.3  1e-19  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3258  methylmalonyl-CoA epimerase  39.1 
 
 
134 aa  95.5  2e-19  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000316472  n/a   
 
 
-
 
NC_010655  Amuc_0200  methylmalonyl-CoA epimerase  41.91 
 
 
140 aa  94.4  5e-19  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.000715247  normal  0.843381 
 
 
-
 
NC_013131  Caci_1258  methylmalonyl-CoA epimerase  37.68 
 
 
147 aa  92.8  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0349  glyoxalase/bleomycin resistance protein/dioxygenase  40.15 
 
 
134 aa  92.4  2e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0717499  normal  0.143694 
 
 
-
 
NC_013739  Cwoe_5865  methylmalonyl-CoA epimerase  39.1 
 
 
136 aa  92  3e-18  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_4198  methylmalonyl-CoA epimerase  38.52 
 
 
134 aa  90.9  5e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.152541  n/a   
 
 
-
 
NC_002950  PG1613  glyoxalase family protein  39.55 
 
 
134 aa  90.9  6e-18  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_0356  methylmalonyl-CoA epimerase  37.23 
 
 
192 aa  90.5  8e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1564  methylmalonyl-CoA epimerase  41.35 
 
 
134 aa  90.5  8e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.395959 
 
 
-
 
NC_011891  A2cp1_4223  methylmalonyl-CoA epimerase  39.39 
 
 
133 aa  90.1  9e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4074  methylmalonyl-CoA epimerase  37.88 
 
 
133 aa  88.2  3e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0584893  n/a   
 
 
-
 
NC_013216  Dtox_1341  methylmalonyl-CoA epimerase  34.92 
 
 
136 aa  87.8  4e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.886384  normal  0.16528 
 
 
-
 
NC_007333  Tfu_2395  methylmalonyl-CoA epimerase  40 
 
 
147 aa  87.8  4e-17  Thermobifida fusca YX  Bacteria  normal  0.754558  n/a   
 
 
-
 
NC_010003  Pmob_0552  methylmalonyl-CoA epimerase  36.15 
 
 
134 aa  87.4  6e-17  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1949  methylmalonyl-CoA epimerase  40.15 
 
 
157 aa  87  9e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  0.331779  n/a   
 
 
-
 
NC_013037  Dfer_3197  methylmalonyl-CoA epimerase  38.06 
 
 
134 aa  86.3  1e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2781  methylmalonyl-CoA epimerase  38.41 
 
 
141 aa  85.9  2e-16  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_1989  methylmalonyl-CoA epimerase  38.93 
 
 
127 aa  84.3  5e-16  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009338  Mflv_2339  glyoxalase/bleomycin resistance protein/dioxygenase  37.5 
 
 
168 aa  82.4  0.000000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.630848  normal  0.527959 
 
 
-
 
NC_011989  Avi_1733  lactoylglutathione lyase  38.97 
 
 
134 aa  81.3  0.000000000000004  Agrobacterium vitis S4  Bacteria  normal  0.881956  n/a   
 
 
-
 
NC_013132  Cpin_0228  methylmalonyl-CoA epimerase  38.35 
 
 
132 aa  80.9  0.000000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1790  glyoxalase/bleomycin resistance protein/dioxygenase  38.69 
 
 
158 aa  80.1  0.000000000000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3993  glyoxalase/bleomycin resistance protein/dioxygenase  33.09 
 
 
159 aa  80.1  0.000000000000009  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00061687 
 
 
-
 
NC_014165  Tbis_0916  methylmalonyl-CoA epimerase  33.82 
 
 
140 aa  80.1  0.00000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.311023 
 
 
-
 
NC_013946  Mrub_2348  methylmalonyl-CoA epimerase  38.64 
 
 
131 aa  80.1  0.00000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4113  methylmalonyl-CoA epimerase  36.3 
 
 
162 aa  79  0.00000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0776501  n/a   
 
 
-
 
NC_013169  Ksed_09410  methylmalonyl-CoA epimerase  33.83 
 
 
145 aa  79  0.00000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.990135  normal  0.273906 
 
 
-
 
CP001800  Ssol_0230  methylmalonyl-CoA epimerase  34.06 
 
 
142 aa  78.6  0.00000000000003  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_013922  Nmag_0555  methylmalonyl-CoA epimerase  37.88 
 
 
127 aa  78.2  0.00000000000004  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007493  RSP_0812  methylmalonyl-CoA epimerase  40 
 
 
134 aa  77  0.00000000000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3611  glyoxalase/bleomycin resistance protein/dioxygenase  32.35 
 
 
157 aa  77  0.00000000000008  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0637  methylmalonyl-CoA epimerase  39.26 
 
 
134 aa  77  0.00000000000009  Ruegeria sp. TM1040  Bacteria  normal  normal  0.355591 
 
 
-
 
NC_008576  Mmc1_0384  methylmalonyl-CoA epimerase  38.06 
 
 
133 aa  76.6  0.00000000000009  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2469  glyoxalase/bleomycin resistance protein/dioxygenase  40 
 
 
134 aa  76.6  0.00000000000009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.186921 
 
 
-
 
NC_013525  Tter_1623  methylmalonyl-CoA epimerase  31.01 
 
 
136 aa  76.6  0.0000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_4306  glyoxalase/bleomycin resistance protein/dioxygenase  36.69 
 
 
161 aa  76.3  0.0000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.725625 
 
 
-
 
NC_009720  Xaut_4617  methylmalonyl-CoA epimerase  38.52 
 
 
134 aa  76.3  0.0000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0621953 
 
 
-
 
NC_010505  Mrad2831_2043  methylmalonyl-CoA epimerase  38.52 
 
 
134 aa  76.6  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.370344  normal 
 
 
-
 
NC_013093  Amir_6105  methylmalonyl-CoA epimerase  34.78 
 
 
146 aa  75.5  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0104  methylmalonyl-CoA epimerase  33.08 
 
 
137 aa  75.1  0.0000000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6000  methylmalonyl-CoA epimerase  35.11 
 
 
143 aa  75.1  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0251153 
 
 
-
 
NC_010511  M446_4406  methylmalonyl-CoA epimerase  39.26 
 
 
134 aa  75.1  0.0000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.865386  normal  0.62826 
 
 
-
 
NC_009667  Oant_2407  methylmalonyl-CoA epimerase  37.14 
 
 
134 aa  74.7  0.0000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.914364  n/a   
 
 
-
 
NC_008254  Meso_1038  methylmalonyl-CoA epimerase  36.3 
 
 
134 aa  74.3  0.0000000000005  Chelativorans sp. BNC1  Bacteria  hitchhiker  0.00716429  n/a   
 
 
-
 
NC_009972  Haur_2006  glyoxalase/bleomycin resistance protein/dioxygenase  30.08 
 
 
140 aa  73.9  0.0000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3865  methylmalonyl-CoA epimerase  33.81 
 
 
156 aa  73.9  0.0000000000007  Mycobacterium sp. MCS  Bacteria  normal  0.241683  n/a   
 
 
-
 
NC_008705  Mkms_3939  methylmalonyl-CoA epimerase  33.81 
 
 
156 aa  73.9  0.0000000000007  Mycobacterium sp. KMS  Bacteria  normal  0.368557  normal  0.0232297 
 
 
-
 
NC_010338  Caul_2814  methylmalonyl-CoA epimerase  35.56 
 
 
138 aa  73.9  0.0000000000007  Caulobacter sp. K31  Bacteria  normal  0.744827  normal  0.836687 
 
 
-
 
NC_014212  Mesil_0680  methylmalonyl-CoA epimerase  36.15 
 
 
131 aa  73.6  0.0000000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  0.227621  normal  0.151437 
 
 
-
 
NC_009077  Mjls_3851  methylmalonyl-CoA epimerase  33.81 
 
 
156 aa  73.6  0.0000000000009  Mycobacterium sp. JLS  Bacteria  normal  hitchhiker  0.00602371 
 
 
-
 
NC_009921  Franean1_2507  glyoxalase/bleomycin resistance protein/dioxygenase  34.78 
 
 
141 aa  73.6  0.0000000000009  Frankia sp. EAN1pec  Bacteria  normal  0.0106102  normal 
 
 
-
 
NC_011666  Msil_2934  methylmalonyl-CoA epimerase  39.26 
 
 
134 aa  73.2  0.000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_4142  methylmalonyl-CoA epimerase  38.52 
 
 
134 aa  73.2  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.65243  n/a   
 
 
-
 
NC_009428  Rsph17025_0368  methylmalonyl-CoA epimerase  39.26 
 
 
134 aa  73.2  0.000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.528801  normal  0.892682 
 
 
-
 
NC_009440  Msed_0639  methylmalonyl-CoA epimerase  31.11 
 
 
140 aa  73.2  0.000000000001  Metallosphaera sedula DSM 5348  Archaea  normal  0.237468  normal  0.259775 
 
 
-
 
NC_009505  BOV_0813  methylmalonyl-CoA epimerase  37.86 
 
 
134 aa  73.2  0.000000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0906  methylmalonyl-CoA epimerase  34.81 
 
 
134 aa  73.2  0.000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.61726  normal 
 
 
-
 
NC_004310  BR0818  glyoxalase family protein  37.86 
 
 
134 aa  72  0.000000000002  Brucella suis 1330  Bacteria  normal  0.688033  n/a   
 
 
-
 
NC_007802  Jann_3164  methylmalonyl-CoA epimerase  39.26 
 
 
134 aa  72  0.000000000003  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1869  methylmalonyl-CoA epimerase  33.83 
 
 
134 aa  72  0.000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.441583  n/a   
 
 
-
 
NC_010581  Bind_2198  methylmalonyl-CoA epimerase  36.3 
 
 
136 aa  71.6  0.000000000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1796  methylmalonyl-CoA epimerase  32.59 
 
 
170 aa  72  0.000000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2630  putative glyoxalase  37.78 
 
 
134 aa  72  0.000000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0581567 
 
 
-
 
NC_011369  Rleg2_1277  methylmalonyl-CoA epimerase  37.04 
 
 
134 aa  71.6  0.000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.149828  normal  0.902197 
 
 
-
 
NC_013595  Sros_1696  methylmalonyl-CoA epimerase  34.31 
 
 
140 aa  70.9  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.019096  normal  0.134039 
 
 
-
 
NC_012850  Rleg_1369  methylmalonyl-CoA epimerase  36.3 
 
 
134 aa  69.3  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_28560  methylmalonyl-CoA epimerase  31.85 
 
 
153 aa  68.9  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.215327 
 
 
-
 
NC_008686  Pden_2178  glyoxalase/bleomycin resistance protein/dioxygenase  37.14 
 
 
134 aa  68.6  0.00000000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.794327  normal 
 
 
-
 
NC_009485  BBta_4545  methylmalonyl-CoA epimerase  32.59 
 
 
134 aa  68.2  0.00000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0847692  normal  0.36006 
 
 
-
 
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