35 homologs were found in PanDaTox collection
for query gene Cag_0433 on replicon NC_007514
Organism: Chlorobium chlorochromatii CaD3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007514  Cag_0433  pyruvoyl-dependent arginine decarboxylase  100 
 
 
181 aa  379  1e-104  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1160  pyruvoyl-dependent arginine decarboxylase  92.82 
 
 
181 aa  355  1.9999999999999998e-97  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0880  pyruvoyl-dependent arginine decarboxylase  91.16 
 
 
181 aa  352  2e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1695  pyruvoyl-dependent arginine decarboxylase  91.16 
 
 
183 aa  351  4e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.405257  n/a   
 
 
-
 
NC_011060  Ppha_0860  pyruvoyl-dependent arginine decarboxylase  91.16 
 
 
181 aa  350  5e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0813  pyruvoyl-dependent arginine decarboxylase  90.06 
 
 
181 aa  347  4e-95  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.0000103228  n/a   
 
 
-
 
NC_007512  Plut_0567  pyruvoyl-dependent arginine decarboxylase  89.5 
 
 
181 aa  347  5e-95  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.168321 
 
 
-
 
NC_010803  Clim_0527  pyruvoyl-dependent arginine decarboxylase  90.06 
 
 
181 aa  346  1e-94  Chlorobium limicola DSM 245  Bacteria  normal  0.0941976  n/a   
 
 
-
 
NC_008639  Cpha266_1029  pyruvoyl-dependent arginine decarboxylase  88.95 
 
 
181 aa  343  1e-93  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0705  pyruvoyl-dependent arginine decarboxylase  85.08 
 
 
181 aa  333  9e-91  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_1809  pyruvoyl-dependent arginine decarboxylase  84.53 
 
 
181 aa  332  2e-90  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1314  pyruvoyl-dependent arginine decarboxylase  64.64 
 
 
181 aa  246  1e-64  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.555968  normal  0.0182689 
 
 
-
 
NC_009712  Mboo_1176  pyruvoyl-dependent arginine decarboxylase  66.48 
 
 
180 aa  245  2e-64  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.760156  normal  0.462598 
 
 
-
 
NC_011832  Mpal_1878  pyruvoyl-dependent arginine decarboxylase  65.54 
 
 
180 aa  242  1.9999999999999999e-63  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_2150  pyruvoyl-dependent arginine decarboxylase  63.69 
 
 
180 aa  232  2.0000000000000002e-60  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_008009  Acid345_1944  pyruvoyl-dependent arginine decarboxylase  58.66 
 
 
185 aa  227  7e-59  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.550989  normal 
 
 
-
 
NC_008554  Sfum_1025  pyruvoyl-dependent arginine decarboxylase  61.02 
 
 
180 aa  225  3e-58  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0470482 
 
 
-
 
NC_007796  Mhun_0113  pyruvoyl-dependent arginine decarboxylase  62.01 
 
 
181 aa  224  3e-58  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010644  Emin_1537  arginine decarboxylase, pyruvoyl-dependent  59.55 
 
 
189 aa  224  5.0000000000000005e-58  Elusimicrobium minutum Pei191  Bacteria  normal  0.0318772  unclonable  9.142679999999999e-20 
 
 
-
 
NC_013926  Aboo_0500  arginine decarboxylase, pyruvoyl-dependent  58.24 
 
 
181 aa  217  7e-56  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_1870  pyruvoyl-dependent arginine decarboxylase  58.1 
 
 
180 aa  213  9.999999999999999e-55  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2492  pyruvoyl-dependent arginine decarboxylase  56.98 
 
 
181 aa  210  9e-54  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.595075  normal 
 
 
-
 
NC_010085  Nmar_1180  arginine decarboxylase  50.28 
 
 
183 aa  194  8.000000000000001e-49  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007355  Mbar_A2039  pyruvoyl-dependent arginine decarboxylase  45.2 
 
 
165 aa  149  2e-35  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0696775  normal  0.231662 
 
 
-
 
NC_008942  Mlab_0203  pyruvoyl-dependent arginine decarboxylase  45.25 
 
 
166 aa  149  3e-35  Methanocorpusculum labreanum Z  Archaea  normal  0.0705303  normal 
 
 
-
 
NC_008698  Tpen_0872  pyruvoyl-dependent arginine decarboxylase  34.09 
 
 
156 aa  58.2  0.00000006  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_009253  Dred_0487  pyruvoyl-dependent arginine decarboxylase  32.43 
 
 
153 aa  51.2  0.000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0124659  n/a   
 
 
-
 
NC_009635  Maeo_0604  pyruvoyl-dependent arginine decarboxylase  27.78 
 
 
165 aa  50.8  0.00001  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0894  pyruvoyl-dependent arginine decarboxylase  28.7 
 
 
164 aa  50.1  0.00002  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1088  pyruvoyl-dependent arginine decarboxylase  27.78 
 
 
164 aa  48.5  0.00005  Methanococcus maripaludis C6  Archaea  normal  0.67804  n/a   
 
 
-
 
NC_008346  Swol_0667  pyruvoyl-dependent arginine decarboxylase  29.79 
 
 
152 aa  47.4  0.0001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.838266  n/a   
 
 
-
 
NC_010718  Nther_0886  Pyruvoyl-dependent arginine decarboxylase  32.2 
 
 
158 aa  46.6  0.0002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.000475255  normal 
 
 
-
 
NC_009637  MmarC7_0829  pyruvoyl-dependent arginine decarboxylase  25.93 
 
 
164 aa  45.8  0.0003  Methanococcus maripaludis C7  Archaea  normal  0.991079  normal 
 
 
-
 
NC_009135  MmarC5_1827  pyruvoyl-dependent arginine decarboxylase  26.85 
 
 
164 aa  46.2  0.0003  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010424  Daud_1980  pyruvoyl-dependent arginine decarboxylase  34.04 
 
 
152 aa  43.9  0.001  Candidatus Desulforudis audaxviator MP104C  Bacteria  decreased coverage  0.0000000794867  n/a   
 
 
-
 
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