More than 300 homologs were found in PanDaTox collection
for query gene Caci_2170 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_2170  extracellular solute-binding protein family 1  100 
 
 
428 aa  857    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  36 
 
 
406 aa  239  9e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_014210  Ndas_2365  extracellular solute-binding protein family 1  30.38 
 
 
416 aa  187  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.618021 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  28.18 
 
 
424 aa  135  9.999999999999999e-31  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  28.09 
 
 
411 aa  127  4.0000000000000003e-28  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  29.49 
 
 
366 aa  122  9.999999999999999e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  27.61 
 
 
410 aa  120  4.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  26.96 
 
 
411 aa  118  3e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  26.93 
 
 
410 aa  116  8.999999999999998e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  28.82 
 
 
410 aa  111  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  27.27 
 
 
429 aa  107  5e-22  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  26.33 
 
 
433 aa  94  5e-18  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  26.6 
 
 
403 aa  90.9  4e-17  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  31.05 
 
 
422 aa  89.4  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  31.25 
 
 
414 aa  89.7  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  25.28 
 
 
399 aa  89  1e-16  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_013131  Caci_2680  extracellular solute-binding protein family 1  27.32 
 
 
458 aa  87.8  3e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  32.34 
 
 
433 aa  87  5e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  25.84 
 
 
432 aa  86.7  7e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  29.38 
 
 
430 aa  86.7  7e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  28.99 
 
 
421 aa  86.3  9e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  25.57 
 
 
420 aa  85.9  0.000000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  30.81 
 
 
419 aa  85.5  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  25.92 
 
 
423 aa  85.1  0.000000000000002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  26.56 
 
 
415 aa  84.7  0.000000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  28.73 
 
 
443 aa  84.7  0.000000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  27.48 
 
 
424 aa  84.3  0.000000000000004  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  25.11 
 
 
433 aa  84  0.000000000000005  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_009921  Franean1_1895  extracellular solute-binding protein  28.68 
 
 
445 aa  83.6  0.000000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.854658  normal 
 
 
-
 
NC_013131  Caci_6904  extracellular solute-binding protein family 1  25.86 
 
 
404 aa  83.2  0.000000000000009  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000382644  hitchhiker  0.00751503 
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  29.39 
 
 
418 aa  82  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  25.47 
 
 
410 aa  82  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_008578  Acel_2049  extracellular solute-binding protein  33.13 
 
 
435 aa  81.6  0.00000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2404  extracellular solute-binding protein family 1  29.65 
 
 
424 aa  81.6  0.00000000000002  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000132449  n/a   
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  28.45 
 
 
431 aa  81.3  0.00000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  25.14 
 
 
410 aa  81.3  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  22.86 
 
 
411 aa  80.1  0.00000000000007  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  25.4 
 
 
421 aa  79.7  0.00000000000009  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_013093  Amir_0403  extracellular solute-binding protein family 1  27.79 
 
 
426 aa  79.3  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.512139  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  26.86 
 
 
415 aa  78.6  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_011369  Rleg2_3669  extracellular solute-binding protein family 1  26.24 
 
 
492 aa  78.2  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4863  extracellular solute-binding protein family 1  26.38 
 
 
492 aa  78.6  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.426159 
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  26.55 
 
 
435 aa  77.8  0.0000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  26.49 
 
 
453 aa  77.8  0.0000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_008578  Acel_0434  extracellular solute-binding protein  26.79 
 
 
452 aa  77.4  0.0000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.396307 
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  26.49 
 
 
425 aa  77  0.0000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  24.75 
 
 
407 aa  77.4  0.0000000000005  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_2719  extracellular solute-binding protein family 1  29.1 
 
 
434 aa  77  0.0000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.233137 
 
 
-
 
NC_013093  Amir_0446  extracellular solute-binding protein family 1  23.22 
 
 
424 aa  77  0.0000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.900099  n/a   
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  23.51 
 
 
432 aa  76.3  0.0000000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  26.18 
 
 
438 aa  75.9  0.000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3052  extracellular solute-binding protein family 1  25.31 
 
 
427 aa  75.9  0.000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.854825  normal  0.208902 
 
 
-
 
NC_013521  Sked_11540  ABC-type sugar transport system, periplasmic component  34.72 
 
 
428 aa  76.3  0.000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0159385 
 
 
-
 
NC_014151  Cfla_3054  extracellular solute-binding protein family 1  26.76 
 
 
429 aa  75.9  0.000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0183103 
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  27.78 
 
 
425 aa  75.1  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  28.38 
 
 
420 aa  75.1  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013530  Xcel_1371  extracellular solute-binding protein family 1  27.5 
 
 
438 aa  75.5  0.000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2252  extracellular solute-binding protein  27.06 
 
 
469 aa  74.7  0.000000000003  Frankia sp. CcI3  Bacteria  hitchhiker  0.00844632  hitchhiker  0.0063434 
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  26.89 
 
 
421 aa  74.7  0.000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  23.96 
 
 
410 aa  74.7  0.000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  25.55 
 
 
426 aa  74.3  0.000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1524  extracellular solute-binding protein family 1  23.74 
 
 
439 aa  73.9  0.000000000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2364  ABC-type sugar transport system periplasmic component-like protein  25.37 
 
 
416 aa  73.6  0.000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128582  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  25 
 
 
423 aa  73.6  0.000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  27.13 
 
 
435 aa  73.2  0.000000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3251  extracellular solute-binding protein family 1  31.73 
 
 
427 aa  72.8  0.00000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.829082  normal 
 
 
-
 
NC_014248  Aazo_0323  family 1 extracellular solute-binding protein  24.93 
 
 
432 aa  72.8  0.00000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  28.57 
 
 
447 aa  72.4  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5365  extracellular solute-binding protein family 1  26.58 
 
 
418 aa  72  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.559287 
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  27.19 
 
 
409 aa  72  0.00000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  27.4 
 
 
456 aa  72  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0477  extracellular solute-binding protein family 1  30.93 
 
 
432 aa  71.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.838392  normal 
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  24.36 
 
 
423 aa  71.6  0.00000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  25.64 
 
 
427 aa  70.9  0.00000000004  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  24 
 
 
410 aa  70.9  0.00000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  24 
 
 
410 aa  70.9  0.00000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  23.14 
 
 
422 aa  70.5  0.00000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  25.14 
 
 
427 aa  70.5  0.00000000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  25.98 
 
 
407 aa  70.9  0.00000000005  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  25.23 
 
 
416 aa  70.1  0.00000000008  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  22.91 
 
 
459 aa  69.7  0.00000000008  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.15 
 
 
420 aa  69.7  0.00000000009  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  25.64 
 
 
435 aa  69.7  0.00000000009  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_014211  Ndas_5074  extracellular solute-binding protein family 1  26.1 
 
 
447 aa  68.9  0.0000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3587  extracellular solute-binding protein family 1  34.09 
 
 
441 aa  69.3  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.935518  normal  0.988969 
 
 
-
 
NC_011881  Achl_4612  extracellular solute-binding protein family 1  30.95 
 
 
437 aa  68.9  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  24.61 
 
 
450 aa  68.9  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_013174  Jden_2072  extracellular solute-binding protein family 1  29.41 
 
 
431 aa  68.6  0.0000000002  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.0000000238529  normal 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  25 
 
 
416 aa  68.2  0.0000000003  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  28.42 
 
 
441 aa  68.2  0.0000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  27.45 
 
 
415 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  29.26 
 
 
438 aa  68.2  0.0000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  25.21 
 
 
419 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  25.12 
 
 
444 aa  67.4  0.0000000004  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  25.19 
 
 
448 aa  67.4  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  26.86 
 
 
440 aa  67.8  0.0000000004  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  28.37 
 
 
504 aa  67.8  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_05420  ABC-type sugar transport system, periplasmic component  28.37 
 
 
438 aa  67.4  0.0000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0143899  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  24.94 
 
 
441 aa  67.4  0.0000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6765  extracellular solute-binding protein family 1  24.79 
 
 
419 aa  66.6  0.0000000008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.979933  normal 
 
 
-
 
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