17 homologs were found in PanDaTox collection
for query gene CPS_3934 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_3934  hypothetical protein  100 
 
 
250 aa  521  1e-147  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3410  hypothetical protein  30.21 
 
 
259 aa  95.5  7e-19  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2544  hypothetical protein  28.76 
 
 
246 aa  71.2  0.00000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.438759  n/a   
 
 
-
 
NC_009997  Sbal195_0697  hypothetical protein  27.39 
 
 
242 aa  67.4  0.0000000002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3690  hypothetical protein  27.39 
 
 
242 aa  67.8  0.0000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0687  hypothetical protein  27.39 
 
 
242 aa  67  0.0000000003  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0666  hypothetical protein  27.39 
 
 
242 aa  66.6  0.0000000003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0585  hypothetical protein  28.25 
 
 
248 aa  67  0.0000000003  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3368  hypothetical protein  30.05 
 
 
248 aa  65.1  0.000000001  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3538  hypothetical protein  29.53 
 
 
248 aa  62  0.000000009  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1156  hypothetical protein  30.87 
 
 
277 aa  58.2  0.0000001  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000585757  decreased coverage  0.00659921 
 
 
-
 
NC_004347  SO_0766.1  hypothetical protein  29.01 
 
 
189 aa  58.2  0.0000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_3228  hypothetical protein  25.6 
 
 
240 aa  57.8  0.0000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1248  hypothetical protein  31.79 
 
 
258 aa  55.1  0.000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0534452  normal  0.591424 
 
 
-
 
NC_009901  Spea_1143  hypothetical protein  27.57 
 
 
295 aa  52.8  0.000005  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000972481  n/a   
 
 
-
 
NC_010506  Swoo_1348  hypothetical protein  29.19 
 
 
258 aa  50.8  0.00002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00722512  decreased coverage  0.000000397841 
 
 
-
 
NC_007947  Mfla_1207  hypothetical protein  25 
 
 
245 aa  47.8  0.0002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
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