12 homologs were found in PanDaTox collection
for query gene CPS_1618 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003910  CPS_1618  putative DNA-binding protein  100 
 
 		 84 aa  171  3.9999999999999995e-42  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_01120  hypothetical protein  38.1 
 
 		 84 aa  69.7  0.00000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_014210  Ndas_4345  transcriptional regulator, XRE family  42.42 
 
 		 135 aa  45.1  0.0004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0197394  normal  0.880673 
 
 
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NC_007492  Pfl01_0204  XRE family transcriptional regulator  34.72 
 
 		 82 aa  44.7  0.0005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009430  Rsph17025_4154  hypothetical protein  38.98 
 
 		 82 aa  44.3  0.0006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_03585  transcriptional regulator  38.46 
 
 		 206 aa  43.1  0.001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
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NC_007520  Tcr_1338  XRE family transcriptional regulator  39.13 
 
 		 198 aa  42.7  0.002  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
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NC_007777  Francci3_2882  XRE family transcriptional regulator  36.67 
 
 		 109 aa  42.4  0.002  Frankia sp. CcI3  Bacteria  hitchhiker  0.00173461  normal  0.866875 
 
 
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NC_007644  Moth_0364  XRE family transcriptional regulator  38.18 
 
 		 100 aa  40.4  0.008  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000740846  normal  1 
 
 
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NC_009486  Tpet_0275  cupin 2 domain-containing protein  39.34 
 
 		 188 aa  40.4  0.009  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.00000000353927  n/a   
 
 
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NC_013202  Hmuk_2743  transcriptional regulator, XRE family  33.33 
 
 		 180 aa  40.4  0.009  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
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NC_013174  Jden_2271  transcriptional regulator, XRE family  31.94 
 
 		 141 aa  40  0.01  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.571583 
 
 
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