9 homologs were found in PanDaTox collection
for query gene CPR_2069 on replicon NC_008262
Organism: Clostridium perfringens SM101



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_2367  major facilitator family transporter  94.71 
 
 
473 aa  893    Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2069  major facilitator transporter  100 
 
 
473 aa  946    Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0538  hypothetical protein  38.33 
 
 
296 aa  225  2e-57  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.184942  hitchhiker  3.68411e-16 
 
 
-
 
NC_008530  LGAS_0539  hypothetical protein  47.18 
 
 
155 aa  144  5e-33  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  2.06239e-16 
 
 
-
 
NC_011899  Hore_20110  major facilitator superfamily MFS_1  21.92 
 
 
447 aa  58.5  0.0000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0889  major facilitator superfamily MFS_1  25.82 
 
 
359 aa  55.5  0.000002  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_010003  Pmob_0925  major facilitator transporter  26.76 
 
 
400 aa  50.1  0.00008  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00183083  n/a   
 
 
-
 
NC_013205  Aaci_2811  major facilitator superfamily MFS_1  27.59 
 
 
419 aa  50.1  0.00009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.501035  n/a   
 
 
-
 
NC_007355  Mbar_A2910  transport protein  20.88 
 
 
432 aa  47.4  0.0006  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.464136  decreased coverage  0.0000430598 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>