12 homologs were found in PanDaTox collection
for query gene CPF_2367 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_2367  major facilitator family transporter  100 
 
 
473 aa  951    Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2069  major facilitator transporter  94.71 
 
 
473 aa  912    Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0538  hypothetical protein  38.68 
 
 
296 aa  229  9e-59  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.184942  hitchhiker  3.68411e-16 
 
 
-
 
NC_008530  LGAS_0539  hypothetical protein  49.3 
 
 
155 aa  148  2.0000000000000003e-34  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  2.06239e-16 
 
 
-
 
NC_011899  Hore_20110  major facilitator superfamily MFS_1  22.67 
 
 
447 aa  58.9  0.0000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0889  major facilitator superfamily MFS_1  24.4 
 
 
359 aa  52  0.00002  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_013205  Aaci_2811  major facilitator superfamily MFS_1  27.2 
 
 
419 aa  49.7  0.0001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.501035  n/a   
 
 
-
 
NC_007355  Mbar_A2910  transport protein  22.09 
 
 
432 aa  47.4  0.0006  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.464136  decreased coverage  0.0000430598 
 
 
-
 
NC_009436  Ent638_1958  general substrate transporter  24.88 
 
 
441 aa  46.2  0.001  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0925  major facilitator transporter  24.88 
 
 
400 aa  43.9  0.007  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00183083  n/a   
 
 
-
 
NC_009718  Fnod_0644  major facilitator transporter  25.17 
 
 
445 aa  43.5  0.008  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_0437  major facilitator transporter  24.43 
 
 
377 aa  43.5  0.009  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
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