10 homologs were found in PanDaTox collection
for query gene CHU_0348 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_0348  hypothetical protein  100 
 
 
131 aa  276  5e-74  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.226361 
 
 
-
 
NC_013440  Hoch_5681  hypothetical protein  33.67 
 
 
223 aa  51.2  0.000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.366064  normal  0.0818693 
 
 
-
 
NC_014148  Plim_1890  protein of unknown function DUF1549  32.22 
 
 
922 aa  48.9  0.00002  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3702  protein of unknown function DUF1549  34.38 
 
 
922 aa  48.1  0.00004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6394  hypothetical protein  30.21 
 
 
135 aa  46.6  0.0001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4084  protein of unknown function DUF1549  34.04 
 
 
917 aa  46.2  0.0001  Spirosoma linguale DSM 74  Bacteria  normal  0.0328965  normal  0.233316 
 
 
-
 
NC_013440  Hoch_3674  Fibronectin type III domain protein  27.01 
 
 
484 aa  45.1  0.0003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.457522  hitchhiker  0.000917339 
 
 
-
 
NC_009427  Saro_3541  hypothetical protein  27.94 
 
 
137 aa  43.9  0.0008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0602  hypothetical protein  27.69 
 
 
124 aa  42.7  0.002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2715  protein of unknown function DUF1549  27.27 
 
 
911 aa  42  0.003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.328097  normal 
 
 
-
 
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