9 homologs were found in PanDaTox collection
for query gene CA2559_12438 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014230  CA2559_12438  transcriptional regulator, XRE family protein  100 
 
 
99 aa  195  1.0000000000000001e-49  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0697698  n/a   
 
 
-
 
NC_007514  Cag_1386  XRE family transcriptional regulator  32.61 
 
 
101 aa  65.9  0.0000000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1858  XRE family transcriptional regulator  34.48 
 
 
100 aa  59.7  0.00000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2425  transcriptional regulator  29.89 
 
 
99 aa  50.4  0.000008  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2125  transcriptional regulator, XRE family  40 
 
 
91 aa  46.6  0.0001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0381  XRE family transcriptional regulator  32.32 
 
 
91 aa  44.3  0.0006  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0650  XRE family transcriptional regulator  35.21 
 
 
91 aa  42.7  0.001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0791  transcriptional regulator, XRE family  36.62 
 
 
91 aa  43.5  0.001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1932  transcriptional regulator, XRE family  38.03 
 
 
91 aa  42.7  0.002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
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