More than 300 homologs were found in PanDaTox collection
for query gene Bxe_C0589 on replicon NC_007953
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007953  Bxe_C0589  putative short-chain dehydrogenase/reductase  100 
 
 
259 aa  522  1e-147  Burkholderia xenovorans LB400  Bacteria  normal  0.398549  normal  0.212573 
 
 
-
 
NC_009719  Plav_0130  short-chain dehydrogenase/reductase SDR  61.78 
 
 
259 aa  336  1.9999999999999998e-91  Parvibaculum lavamentivorans DS-1  Bacteria  hitchhiker  0.0000437524  normal 
 
 
-
 
NC_010338  Caul_1891  short-chain dehydrogenase/reductase SDR  57.92 
 
 
259 aa  300  2e-80  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1811  short-chain dehydrogenase/reductase SDR  54.05 
 
 
259 aa  268  8.999999999999999e-71  Dickeya dadantii Ech703  Bacteria  normal  0.930185  n/a   
 
 
-
 
NC_009485  BBta_1210  putative 3-oxoacyl-(acyl-carrier-protein) reductase  53.08 
 
 
260 aa  258  8e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.475284  normal 
 
 
-
 
NC_010084  Bmul_0986  short-chain dehydrogenase/reductase SDR  51.74 
 
 
278 aa  258  9e-68  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1722  short-chain dehydrogenase/reductase SDR  54.83 
 
 
259 aa  253  2.0000000000000002e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.736401  normal  0.528714 
 
 
-
 
NC_009667  Oant_2101  short-chain dehydrogenase/reductase SDR  49.81 
 
 
259 aa  252  5.000000000000001e-66  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.511281  n/a   
 
 
-
 
NC_010551  BamMC406_2208  short-chain dehydrogenase/reductase SDR  51.74 
 
 
259 aa  251  6e-66  Burkholderia ambifaria MC40-6  Bacteria  normal  0.336154  normal  0.942948 
 
 
-
 
NC_008390  Bamb_2330  short-chain dehydrogenase/reductase SDR  51.74 
 
 
259 aa  251  6e-66  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5619  Short-chain dehydrogenase/reductase SDR  50.19 
 
 
277 aa  249  4e-65  Burkholderia sp. 383  Bacteria  normal  0.0753007  normal 
 
 
-
 
NC_007651  BTH_I1017  short chain dehydrogenase/reductase family oxidoreductase  50.58 
 
 
325 aa  249  4e-65  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3830  short-chain dehydrogenase/reductase SDR  53.26 
 
 
259 aa  248  7e-65  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3795  short-chain dehydrogenase/reductase SDR  53.08 
 
 
260 aa  245  4e-64  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A0789  short chain dehydrogenase/reductase family oxidoreductase  52.51 
 
 
259 aa  245  4.9999999999999997e-64  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0355352  n/a   
 
 
-
 
NC_006348  BMA1882  short chain dehydrogenase/reductase family oxidoreductase  52.51 
 
 
259 aa  245  4.9999999999999997e-64  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0800306  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1078  short chain dehydrogenase/reductase family oxidoreductase  52.51 
 
 
259 aa  245  4.9999999999999997e-64  Burkholderia mallei SAVP1  Bacteria  normal  0.296983  n/a   
 
 
-
 
NC_007434  BURPS1710b_1388  short chain dehydrogenase/reductase family oxidoreductase  52.51 
 
 
259 aa  245  4.9999999999999997e-64  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1234  short chain dehydrogenase/reductase family oxidoreductase  52.51 
 
 
259 aa  245  4.9999999999999997e-64  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1243  short chain dehydrogenase/reductase family oxidoreductase  52.51 
 
 
259 aa  245  4.9999999999999997e-64  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00809972  n/a   
 
 
-
 
NC_009080  BMA10247_0361  short chain dehydrogenase/reductase family oxidoreductase  52.51 
 
 
259 aa  245  4.9999999999999997e-64  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0730868  n/a   
 
 
-
 
NC_007951  Bxe_A3257  putative 3-oxoacyl-acyl carrier protein reductase  49.03 
 
 
259 aa  245  6e-64  Burkholderia xenovorans LB400  Bacteria  normal  0.0566153  normal  0.418945 
 
 
-
 
NC_010508  Bcenmc03_2315  short-chain dehydrogenase/reductase SDR  49.42 
 
 
259 aa  245  6.999999999999999e-64  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.400056 
 
 
-
 
NC_008254  Meso_1537  short-chain dehydrogenase/reductase SDR  48.26 
 
 
259 aa  244  9.999999999999999e-64  Chelativorans sp. BNC1  Bacteria  normal  0.460679  n/a   
 
 
-
 
NC_008060  Bcen_1680  short-chain dehydrogenase/reductase SDR  49.03 
 
 
285 aa  243  1.9999999999999999e-63  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0641216  n/a   
 
 
-
 
NC_008542  Bcen2424_2292  short-chain dehydrogenase/reductase SDR  49.03 
 
 
259 aa  243  1.9999999999999999e-63  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2062  short-chain dehydrogenase/reductase SDR  49.42 
 
 
259 aa  242  3.9999999999999997e-63  Burkholderia phymatum STM815  Bacteria  normal  0.861645  normal  0.226141 
 
 
-
 
NC_010681  Bphyt_1303  short-chain dehydrogenase/reductase SDR  47.88 
 
 
259 aa  240  1e-62  Burkholderia phytofirmans PsJN  Bacteria  normal  0.154867  normal  0.0871554 
 
 
-
 
NC_010717  PXO_03629  oxidoreductase  50.78 
 
 
258 aa  240  2e-62  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3177  short-chain dehydrogenase/reductase SDR  51.91 
 
 
258 aa  238  5.999999999999999e-62  Pseudomonas putida F1  Bacteria  normal  normal  0.567568 
 
 
-
 
NC_010524  Lcho_1226  short-chain dehydrogenase/reductase SDR  49.62 
 
 
263 aa  238  6.999999999999999e-62  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_2024  short-chain dehydrogenase/reductase SDR  52.67 
 
 
258 aa  238  6.999999999999999e-62  Pseudomonas putida GB-1  Bacteria  normal  0.298877  normal 
 
 
-
 
NC_002947  PP_2540  short chain dehydrogenase/reductase family oxidoreductase  51.91 
 
 
258 aa  236  2e-61  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00698134 
 
 
-
 
NC_011004  Rpal_1879  short-chain dehydrogenase/reductase SDR  50.19 
 
 
260 aa  235  5.0000000000000005e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2277  short-chain dehydrogenase/reductase SDR  49.03 
 
 
259 aa  234  1.0000000000000001e-60  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3053  oxidoreductase  52.31 
 
 
260 aa  232  5e-60  Methylibium petroleiphilum PM1  Bacteria  normal  0.42458  normal 
 
 
-
 
NC_009428  Rsph17025_1985  short-chain dehydrogenase/reductase SDR  49.22 
 
 
261 aa  232  5e-60  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.274604 
 
 
-
 
NC_008686  Pden_2349  short-chain dehydrogenase/reductase SDR  47.86 
 
 
260 aa  228  6e-59  Paracoccus denitrificans PD1222  Bacteria  normal  0.482868  normal 
 
 
-
 
NC_007493  RSP_2538  Short-chain dehydrogenase/reductase  49.22 
 
 
259 aa  226  2e-58  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1197  short-chain dehydrogenase/reductase SDR  49.22 
 
 
264 aa  227  2e-58  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0866404 
 
 
-
 
NC_007778  RPB_3849  short-chain dehydrogenase/reductase SDR  51.16 
 
 
260 aa  226  3e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2383  short-chain dehydrogenase/reductase SDR  47.15 
 
 
263 aa  226  3e-58  Ralstonia pickettii 12J  Bacteria  normal  0.378112  normal 
 
 
-
 
NC_012856  Rpic12D_1983  short-chain dehydrogenase/reductase SDR  47.15 
 
 
263 aa  226  3e-58  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4114  short-chain dehydrogenase/reductase SDR  45.56 
 
 
259 aa  224  7e-58  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.245647 
 
 
-
 
NC_010002  Daci_5391  short-chain dehydrogenase/reductase SDR  48.3 
 
 
265 aa  224  8e-58  Delftia acidovorans SPH-1  Bacteria  normal  0.602708  normal  0.800249 
 
 
-
 
NC_008781  Pnap_3235  short-chain dehydrogenase/reductase SDR  47.92 
 
 
264 aa  224  8e-58  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2186  dehydrogenase/reductase oxidoreductase protein  47.53 
 
 
263 aa  223  2e-57  Ralstonia solanacearum GMI1000  Bacteria  normal  0.158551  normal 
 
 
-
 
NC_007347  Reut_A2505  Short-chain dehydrogenase/reductase SDR  46.95 
 
 
262 aa  223  2e-57  Ralstonia eutropha JMP134  Bacteria  normal  0.80685  n/a   
 
 
-
 
NC_007958  RPD_1500  short-chain dehydrogenase/reductase SDR  50.19 
 
 
260 aa  223  3e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2744  short-chain dehydrogenase/reductase SDR  45.29 
 
 
276 aa  222  4e-57  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1256  short-chain dehydrogenase/reductase SDR  46.97 
 
 
264 aa  222  4e-57  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1641  short-chain dehydrogenase/reductase SDR  50.58 
 
 
260 aa  221  8e-57  Acidiphilium cryptum JF-5  Bacteria  normal  0.285403  n/a   
 
 
-
 
NC_008752  Aave_1080  short-chain dehydrogenase/reductase SDR  46.01 
 
 
276 aa  220  1.9999999999999999e-56  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_16730  glucose/ribitol dehydrogenase family protein  48.69 
 
 
262 aa  218  7.999999999999999e-56  Azotobacter vinelandii DJ  Bacteria  normal  0.681173  n/a   
 
 
-
 
NC_009952  Dshi_1339  short-chain dehydrogenase/reductase SDR  46.88 
 
 
259 aa  218  7.999999999999999e-56  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0406347 
 
 
-
 
NC_007802  Jann_1207  short-chain dehydrogenase/reductase SDR  45.31 
 
 
259 aa  212  4.9999999999999996e-54  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1803  short-chain dehydrogenase/reductase SDR  43.75 
 
 
259 aa  210  2e-53  Ruegeria sp. TM1040  Bacteria  normal  0.560822  normal  0.0105475 
 
 
-
 
NC_007948  Bpro_3876  short-chain dehydrogenase/reductase SDR  45.83 
 
 
264 aa  209  4e-53  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6431  short-chain dehydrogenase/reductase SDR  48.22 
 
 
247 aa  207  1e-52  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.417621 
 
 
-
 
NC_007908  Rfer_3195  short-chain dehydrogenase/reductase SDR  45.52 
 
 
264 aa  206  3e-52  Rhodoferax ferrireducens T118  Bacteria  normal  0.857266  n/a   
 
 
-
 
NC_007973  Rmet_0791  short-chain dehydrogenase/reductase SDR  44.29 
 
 
238 aa  178  8e-44  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.1335 
 
 
-
 
NC_011989  Avi_1391  NAD/NADP dependent oxidoreductase  39.31 
 
 
261 aa  167  2e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0758  short-chain dehydrogenase/reductase SDR  36.88 
 
 
262 aa  166  4e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_3777  short-chain dehydrogenase/reductase SDR  37.98 
 
 
262 aa  163  2.0000000000000002e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1077  short-chain dehydrogenase/reductase SDR  40.86 
 
 
262 aa  163  3e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1069  short-chain dehydrogenase/reductase SDR  35.5 
 
 
261 aa  160  2e-38  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.199007  n/a   
 
 
-
 
NC_014212  Mesil_0968  short-chain dehydrogenase/reductase SDR  35.5 
 
 
261 aa  157  1e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.274647 
 
 
-
 
NC_008554  Sfum_0112  short-chain dehydrogenase/reductase SDR  33.21 
 
 
263 aa  157  2e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1799  short-chain dehydrogenase/reductase SDR  36.19 
 
 
261 aa  155  7e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_3385  short-chain dehydrogenase/reductase SDR  39.54 
 
 
248 aa  154  1e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0734499  n/a   
 
 
-
 
NC_009674  Bcer98_1545  short-chain dehydrogenase/reductase SDR  33.59 
 
 
261 aa  152  7e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00435006  n/a   
 
 
-
 
NC_011886  Achl_3307  short-chain dehydrogenase/reductase SDR  38.7 
 
 
266 aa  149  4e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_1551  short-chain dehydrogenase/reductase SDR  40.15 
 
 
261 aa  149  4e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  hitchhiker  0.00433657 
 
 
-
 
NC_009636  Smed_3570  short-chain dehydrogenase/reductase SDR  37.69 
 
 
259 aa  148  8e-35  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.00199675 
 
 
-
 
NC_013926  Aboo_0462  short-chain dehydrogenase/reductase SDR  32.43 
 
 
267 aa  147  1.0000000000000001e-34  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0923  short-chain dehydrogenase/reductase SDR  34.48 
 
 
261 aa  147  1.0000000000000001e-34  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3844  short-chain dehydrogenase/reductase SDR  39 
 
 
257 aa  145  6e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0315057  normal  0.582541 
 
 
-
 
NC_007413  Ava_0311  Short-chain dehydrogenase/reductase SDR  35.21 
 
 
262 aa  145  7.0000000000000006e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5987  short-chain dehydrogenase/reductase SDR  37.6 
 
 
260 aa  145  9e-34  Methylobacterium sp. 4-46  Bacteria  normal  0.389039  normal  0.0700115 
 
 
-
 
NC_013037  Dfer_3075  short-chain dehydrogenase/reductase SDR  34.98 
 
 
262 aa  144  2e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.209308  normal 
 
 
-
 
NC_014230  CA2559_07435  putative short-chain dehydrogenase/reductase  32.57 
 
 
269 aa  144  2e-33  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.492431  n/a   
 
 
-
 
NC_010725  Mpop_4560  short-chain dehydrogenase/reductase SDR  36.06 
 
 
268 aa  142  4e-33  Methylobacterium populi BJ001  Bacteria  normal  normal  0.62458 
 
 
-
 
NC_011894  Mnod_7299  short-chain dehydrogenase/reductase SDR  36.43 
 
 
260 aa  142  7e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1090  short-chain dehydrogenase/reductase SDR  35.66 
 
 
262 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.538623 
 
 
-
 
NC_007493  RSP_0610  putative 3-oxoacyl-(acyl-carrier-protein) reductase  35.71 
 
 
268 aa  140  3e-32  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1646  short-chain dehydrogenase/reductase SDR  34.65 
 
 
237 aa  140  3e-32  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008243  Meso_4522  short-chain dehydrogenase/reductase SDR  35.41 
 
 
261 aa  139  4.999999999999999e-32  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0816  short-chain dehydrogenase/reductase SDR  37.27 
 
 
271 aa  138  7e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1963  short-chain dehydrogenase/reductase SDR  38.1 
 
 
245 aa  137  2e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.35981 
 
 
-
 
NC_013730  Slin_5846  short-chain dehydrogenase/reductase SDR  33.07 
 
 
262 aa  137  3.0000000000000003e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.704953 
 
 
-
 
NC_007494  RSP_3440  putative short chain dehydrogenase  37.74 
 
 
261 aa  135  5e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1462  short-chain dehydrogenase/reductase SDR  31.25 
 
 
261 aa  135  7.000000000000001e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4079  short-chain dehydrogenase/reductase SDR  35.21 
 
 
268 aa  135  8e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.130432  normal 
 
 
-
 
NC_010525  Tneu_0044  short-chain dehydrogenase/reductase SDR  32.41 
 
 
259 aa  135  8e-31  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal  0.0333473 
 
 
-
 
NC_011757  Mchl_4447  short-chain dehydrogenase/reductase SDR  35.21 
 
 
268 aa  135  8e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0883  short-chain dehydrogenase/reductase SDR  36.47 
 
 
264 aa  135  8e-31  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3085  short-chain dehydrogenase/reductase SDR  37.35 
 
 
261 aa  134  9.999999999999999e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.696622  normal  0.57076 
 
 
-
 
NC_009376  Pars_0047  short-chain dehydrogenase/reductase SDR  33.99 
 
 
260 aa  134  9.999999999999999e-31  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_008701  Pisl_1089  short-chain dehydrogenase/reductase SDR  31.62 
 
 
260 aa  134  9.999999999999999e-31  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_0013  short-chain dehydrogenase/reductase SDR  33.6 
 
 
260 aa  133  1.9999999999999998e-30  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
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