More than 300 homologs were found in PanDaTox collection
for query gene Bxe_C0325 on replicon NC_007953
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_2413  Carbamoyl-phosphate synthase L chain ATP-binding  48.82 
 
 
1103 aa  941    Ralstonia pickettii 12J  Bacteria  normal  0.370889  normal 
 
 
-
 
NC_010338  Caul_4464  pyruvate carboxylase., methylmalonyl-CoA carboxytransferase  49.16 
 
 
1067 aa  847    Caulobacter sp. K31  Bacteria  normal  0.0495259  normal 
 
 
-
 
NC_010002  Daci_1073  carbamoyl-phosphate synthase L chain ATP-binding  45.12 
 
 
1097 aa  806    Delftia acidovorans SPH-1  Bacteria  normal  normal  0.398596 
 
 
-
 
NC_012856  Rpic12D_2019  Carbamoyl-phosphate synthase L chain ATP-binding  48.77 
 
 
1103 aa  902    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1872  Carbamoyl-phosphate synthase L chain ATP- binding protein  47.11 
 
 
1054 aa  796    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2997  pyruvate carboxylase., propionyl-CoA carboxylase  49.36 
 
 
1112 aa  909    Ralstonia eutropha JMP134  Bacteria  normal  0.717985  n/a   
 
 
-
 
NC_007348  Reut_B3892  pyruvate carboxylase., propionyl-CoA carboxylase  46.85 
 
 
1105 aa  850    Ralstonia eutropha JMP134  Bacteria  normal  0.222877  n/a   
 
 
-
 
NC_009719  Plav_2692  carbamoyl-phosphate synthase L chain ATP-binding  47.3 
 
 
1091 aa  949    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.246578  normal 
 
 
-
 
NC_009092  Shew_2867  pyruvate carboxylase, propionyl-CoA carboxylase  44.35 
 
 
1094 aa  879    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0228  pyruvate carboxylase  46.64 
 
 
1102 aa  872    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4792  Carbamoyl-phosphate synthase L chain ATP-binding  47.74 
 
 
1098 aa  874    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0325  putative carbamoyl-phosphate synthase/carboxyltransferase  100 
 
 
1033 aa  2060    Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00413632  normal  0.277217 
 
 
-
 
NC_007958  RPD_0602  carbamoyl-phosphate synthase L chain, ATP-binding  46.73 
 
 
1102 aa  873    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1636  Carbamoyl-phosphate synthase L chain ATP-binding  47.23 
 
 
1103 aa  878    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4069  acetyl-CoA carboxylase (biotin carboxylase and carboxyl transferase domains) / biotin carboxyl carrier protein  47.74 
 
 
1126 aa  872    Cupriavidus metallidurans CH34  Bacteria  normal  0.0299228  normal 
 
 
-
 
NC_007974  Rmet_4971  putative carbamoyl-phosphate synthase L chain, ATP-binding  45.9 
 
 
1152 aa  819    Cupriavidus metallidurans CH34  Bacteria  normal  0.266349  normal  0.508617 
 
 
-
 
NC_009656  PSPA7_3940  biotin carboxylase  48.72 
 
 
1095 aa  905    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1682  carbamoyl-phosphate synthase L chain, ATP-binding  47.25 
 
 
1097 aa  840    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_46320  putative pyruvate carboxylase  48.99 
 
 
1095 aa  901    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.948302  normal  0.0234216 
 
 
-
 
NC_009439  Pmen_3842  pyruvate carboxylase., propionyl-CoA carboxylase  48.45 
 
 
1090 aa  924    Pseudomonas mendocina ymp  Bacteria  normal  0.735507  normal 
 
 
-
 
NC_013510  Tcur_1862  carboxyl transferase  59.93 
 
 
602 aa  631  1e-179  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00333639  n/a   
 
 
-
 
NC_007908  Rfer_3899  propionyl-CoA carboxylase  49.34 
 
 
610 aa  560  1e-158  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1889  propionyl-CoA carboxylase  52.7 
 
 
519 aa  547  1e-154  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2712  carboxyl transferase  52.86 
 
 
524 aa  497  1e-139  Conexibacter woesei DSM 14684  Bacteria  normal  0.0757047  normal  0.0196449 
 
 
-
 
NC_008726  Mvan_0066  propionyl-CoA carboxylase  54.13 
 
 
519 aa  494  9.999999999999999e-139  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.229003 
 
 
-
 
NC_009338  Mflv_0781  propionyl-CoA carboxylase  53.52 
 
 
518 aa  490  1e-137  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.576525  normal 
 
 
-
 
NC_009077  Mjls_2710  propionyl-CoA carboxylase  52.68 
 
 
503 aa  488  1e-136  Mycobacterium sp. JLS  Bacteria  normal  0.595961  normal  0.61988 
 
 
-
 
NC_008705  Mkms_2724  propionyl-CoA carboxylase  52.49 
 
 
503 aa  486  1e-136  Mycobacterium sp. KMS  Bacteria  normal  normal  0.173098 
 
 
-
 
NC_008146  Mmcs_2679  propionyl-CoA carboxylase  52.49 
 
 
503 aa  486  1e-136  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1271  propionyl-CoA carboxylase  42.42 
 
 
600 aa  468  9.999999999999999e-131  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0521  acetyl-CoA carboxylase, biotin carboxylase  41.29 
 
 
448 aa  355  2.9999999999999997e-96  Clostridium phytofermentans ISDg  Bacteria  normal  0.0922671  n/a   
 
 
-
 
NC_009565  TBFG_12523  acetyl-/propionyl-coenzyme A carboxylase subunit alpha  44.64 
 
 
654 aa  348  3e-94  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.881887 
 
 
-
 
NC_002976  SERP0704  pyruvate carboxylase  40.75 
 
 
1147 aa  348  4e-94  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0984  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  41.39 
 
 
446 aa  345  2e-93  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000016105  normal  0.0128167 
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  41.61 
 
 
446 aa  345  2e-93  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_009632  SaurJH1_1196  pyruvate carboxylase  40.97 
 
 
1150 aa  344  5e-93  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1174  pyruvate carboxylase  40.97 
 
 
1150 aa  344  5e-93  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.810456  n/a   
 
 
-
 
NC_008346  Swol_0519  pyruvate carboxylase  40.22 
 
 
1144 aa  343  1e-92  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0972  pyruvate carboxylase  44.67 
 
 
1165 aa  343  1e-92  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0428493 
 
 
-
 
NC_012918  GM21_2654  acetyl-CoA carboxylase, biotin carboxylase  42.51 
 
 
446 aa  342  2e-92  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000129379 
 
 
-
 
NC_011666  Msil_1360  pyruvate carboxylase  42.8 
 
 
1147 aa  342  2e-92  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0615601 
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  40.72 
 
 
446 aa  340  7e-92  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_014212  Mesil_2028  acetyl-CoA carboxylase, biotin carboxylase  42.93 
 
 
446 aa  340  8e-92  Meiothermus silvanus DSM 9946  Bacteria  normal  0.256761  normal 
 
 
-
 
NC_009077  Mjls_3635  carbamoyl-phosphate synthase L chain, ATP-binding  45.64 
 
 
662 aa  339  9.999999999999999e-92  Mycobacterium sp. JLS  Bacteria  normal  0.165726  normal 
 
 
-
 
NC_011146  Gbem_1562  acetyl-CoA carboxylase, biotin carboxylase  42.06 
 
 
446 aa  338  3.9999999999999995e-91  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00815818  n/a   
 
 
-
 
NC_012850  Rleg_1730  acetyl-CoA carboxylase biotin carboxylase subunit  41.63 
 
 
449 aa  337  7e-91  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.011677  normal  0.0952883 
 
 
-
 
NC_008609  Ppro_2022  acetyl-CoA carboxylase, biotin carboxylase  40.94 
 
 
446 aa  337  7e-91  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0711095  n/a   
 
 
-
 
NC_011989  Avi_1787  acetyl-CoA carboxylase biotin carboxylase subunit  41.59 
 
 
450 aa  336  1e-90  Agrobacterium vitis S4  Bacteria  normal  0.0397228  n/a   
 
 
-
 
NC_013739  Cwoe_2457  pyruvate carboxylase  44.71 
 
 
1127 aa  337  1e-90  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.000300234 
 
 
-
 
NC_013757  Gobs_1473  Carbamoyl-phosphate synthase L chain ATP- binding protein  45.5 
 
 
666 aa  335  2e-90  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1536  acetyl-CoA carboxylase biotin carboxylase subunit  42.69 
 
 
449 aa  335  2e-90  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3703  carbamoyl-phosphate synthase L chain, ATP-binding  45.19 
 
 
662 aa  335  2e-90  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3630  carbamoyl-phosphate synthase L chain, ATP-binding protein  45.19 
 
 
662 aa  335  2e-90  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4090  carbamoyl-phosphate synthase L chain, ATP-binding  45.5 
 
 
660 aa  335  3e-90  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.734303  normal 
 
 
-
 
NC_013216  Dtox_2602  acetyl-CoA carboxylase, biotin carboxylase  40.36 
 
 
447 aa  334  6e-90  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.000536628  normal 
 
 
-
 
NC_013124  Afer_0730  Carbamoyl-phosphate synthase L chain ATP- binding  39.56 
 
 
588 aa  333  9e-90  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.858294  n/a   
 
 
-
 
NC_010814  Glov_1598  acetyl-CoA carboxylase, biotin carboxylase  39.82 
 
 
446 aa  333  1e-89  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000269909  n/a   
 
 
-
 
NC_009428  Rsph17025_1454  acetyl-CoA carboxylase biotin carboxylase subunit  40.58 
 
 
448 aa  332  2e-89  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2715  acetyl-CoA carboxylase biotin carboxylase subunit  41.53 
 
 
448 aa  332  3e-89  Jannaschia sp. CCS1  Bacteria  normal  0.0856039  normal 
 
 
-
 
NC_009667  Oant_2274  acetyl-CoA carboxylase biotin carboxylase subunit  42.92 
 
 
459 aa  331  4e-89  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.41756  n/a   
 
 
-
 
NC_013161  Cyan8802_1455  acetyl-CoA carboxylase biotin carboxylase subunit  39.1 
 
 
449 aa  330  7e-89  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS3859  pyruvate carboxylase  40.44 
 
 
1148 aa  330  9e-89  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4157  pyruvate carboxylase  40.44 
 
 
1148 aa  330  9e-89  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.820084  n/a   
 
 
-
 
NC_005957  BT9727_3690  pyruvate carboxylase  40.44 
 
 
1148 aa  329  1.0000000000000001e-88  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0191  acetyl-CoA carboxylase biotin carboxylase subunit  40.35 
 
 
448 aa  329  1.0000000000000001e-88  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_00691  acetyl-CoA carboxylase biotin carboxylase subunit  39.37 
 
 
449 aa  330  1.0000000000000001e-88  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.36167  n/a   
 
 
-
 
NC_008687  Pden_4144  pyruvate carboxylase  42.36 
 
 
1144 aa  329  2.0000000000000001e-88  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.407783 
 
 
-
 
NC_006274  BCZK3707  pyruvate carboxylase  40.22 
 
 
1148 aa  328  2.0000000000000001e-88  Bacillus cereus E33L  Bacteria  normal  0.863258  n/a   
 
 
-
 
NC_011773  BCAH820_3962  pyruvate carboxylase  40.44 
 
 
1148 aa  329  2.0000000000000001e-88  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009636  Smed_3139  pyruvate carboxylase  39.52 
 
 
1184 aa  329  2.0000000000000001e-88  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  41.48 
 
 
652 aa  328  2.0000000000000001e-88  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_007777  Francci3_1528  carbamoyl-phosphate synthase L chain, ATP-binding  43.5 
 
 
734 aa  328  2.0000000000000001e-88  Frankia sp. CcI3  Bacteria  normal  0.890646  normal 
 
 
-
 
NC_009674  Bcer98_2649  pyruvate carboxylase  40.22 
 
 
1148 aa  329  2.0000000000000001e-88  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00733169  n/a   
 
 
-
 
NC_011726  PCC8801_1426  acetyl-CoA carboxylase biotin carboxylase subunit  38.88 
 
 
449 aa  329  2.0000000000000001e-88  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007577  PMT9312_0062  acetyl-CoA carboxylase biotin carboxylase subunit  39.15 
 
 
448 aa  328  3e-88  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0761  acetyl-CoA carboxylase biotin carboxylase subunit  41.57 
 
 
446 aa  328  3e-88  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1824  acetyl-CoA carboxylase biotin carboxylase subunit  40.13 
 
 
448 aa  328  4.0000000000000003e-88  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.469721 
 
 
-
 
NC_004310  BR0906  acetyl-CoA carboxylase biotin carboxylase subunit  42.47 
 
 
452 aa  327  5e-88  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4065  pyruvate carboxylase  40.22 
 
 
1148 aa  327  5e-88  Bacillus cereus AH187  Bacteria  normal  0.0164116  n/a   
 
 
-
 
NC_009505  BOV_0902  acetyl-CoA carboxylase biotin carboxylase subunit  42.47 
 
 
452 aa  327  5e-88  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3994  pyruvate carboxylase  40.22 
 
 
1148 aa  327  6e-88  Bacillus cereus ATCC 10987  Bacteria  normal  0.882525  n/a   
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  42.38 
 
 
653 aa  327  6e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_009091  P9301_00711  acetyl-CoA carboxylase biotin carboxylase subunit  38.93 
 
 
449 aa  327  7e-88  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1043  Carbamoyl-phosphate synthase L chain ATP-binding  38.89 
 
 
476 aa  327  7e-88  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_006691  CNF00650  pyruvate carboxylase, putative  41.97 
 
 
1103 aa  325  2e-87  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.242761  n/a   
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  39.55 
 
 
448 aa  326  2e-87  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_011772  BCG9842_B1190  pyruvate carboxylase  40.22 
 
 
1148 aa  325  2e-87  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  42.57 
 
 
665 aa  326  2e-87  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_008254  Meso_3329  pyruvate carboxylase  40.61 
 
 
1158 aa  325  2e-87  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0703  urea amidolyase related protein  41.85 
 
 
1209 aa  325  2e-87  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2127  acetyl-CoA carboxylase/biotin carboxylase  39.6 
 
 
445 aa  325  3e-87  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1379  acetyl-CoA carboxylase biotin carboxylase subunit  39.29 
 
 
453 aa  325  3e-87  Synechococcus elongatus PCC 7942  Bacteria  normal  0.34087  normal 
 
 
-
 
NC_011689  PHATRDRAFT_49339  precursor of carboxylase pyruvate carboxylase  43.04 
 
 
1264 aa  325  3e-87  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0980  pyruvate carboxylase  40 
 
 
1147 aa  324  4e-87  Geobacillus sp. WCH70  Bacteria  normal  0.125957  n/a   
 
 
-
 
NC_008816  A9601_00721  acetyl-CoA carboxylase biotin carboxylase subunit  38.7 
 
 
449 aa  325  4e-87  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.249054  n/a   
 
 
-
 
NC_009636  Smed_0952  acetyl-CoA carboxylase biotin carboxylase subunit  41.88 
 
 
447 aa  324  5e-87  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0509538 
 
 
-
 
NC_010338  Caul_2564  acetyl-CoA carboxylase biotin carboxylase subunit  43.84 
 
 
447 aa  324  6e-87  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1518  acetyl-CoA carboxylase biotin carboxylase subunit  40.09 
 
 
449 aa  324  6e-87  Ruegeria sp. TM1040  Bacteria  normal  0.0122051  normal  0.737322 
 
 
-
 
NC_008254  Meso_1716  acetyl-CoA carboxylase biotin carboxylase subunit  41.46 
 
 
447 aa  324  6e-87  Chelativorans sp. BNC1  Bacteria  normal  0.305928  n/a   
 
 
-
 
NC_008347  Mmar10_1142  pyruvate carboxylase  42.45 
 
 
1146 aa  324  6e-87  Maricaulis maris MCS10  Bacteria  normal  0.0248368  normal  0.044238 
 
 
-
 
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