More than 300 homologs were found in PanDaTox collection
for query gene Bxe_A4071 on replicon NC_007951
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007951  Bxe_A4071  two component LuxR family transcriptional regulator  100 
 
 
221 aa  446  1.0000000000000001e-124  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0629  two component transcriptional regulator, LuxR family  74.65 
 
 
230 aa  327  1.0000000000000001e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  0.452847  normal  0.285643 
 
 
-
 
NC_010622  Bphy_0354  two component LuxR family transcriptional regulator  58.37 
 
 
217 aa  234  1.0000000000000001e-60  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1294  LuxR response regulator receiver  40.85 
 
 
220 aa  152  2.9999999999999998e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.721447 
 
 
-
 
NC_007348  Reut_B5845  LuxR response regulator receiver  38.79 
 
 
214 aa  150  2e-35  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2872  two component LuxR family transcriptional regulator  38.36 
 
 
235 aa  142  3e-33  Burkholderia phymatum STM815  Bacteria  normal  0.891055  hitchhiker  0.000000000201971 
 
 
-
 
NC_010681  Bphyt_3677  two component transcriptional regulator, LuxR family  35.78 
 
 
229 aa  136  3.0000000000000003e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0102182  hitchhiker  0.0000000000674126 
 
 
-
 
NC_011071  Smal_0155  two component transcriptional regulator, LuxR family  38.07 
 
 
212 aa  135  3.0000000000000003e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0280  two component LuxR family transcriptional regulator  35.78 
 
 
229 aa  135  6.0000000000000005e-31  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00188137 
 
 
-
 
NC_004347  SO_4444  capsular synthesis regulator component B, putative  34.26 
 
 
212 aa  134  9.999999999999999e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007651  BTH_I2674  DNA-binding response regulator  38.6 
 
 
210 aa  134  9.999999999999999e-31  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1618  DNA-binding response regulator  37.5 
 
 
210 aa  132  3e-30  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0685  capsular synthesis regulator component B  37.04 
 
 
210 aa  132  3.9999999999999996e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  0.394747  n/a   
 
 
-
 
NC_009076  BURPS1106A_1640  capsular synthesis regulator component B  37.04 
 
 
210 aa  132  3.9999999999999996e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0841891  n/a   
 
 
-
 
NC_006348  BMA0879  DNA-binding response regulator  37.04 
 
 
210 aa  132  3.9999999999999996e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.888299  n/a   
 
 
-
 
NC_007434  BURPS1710b_1797  DNA-binding response regulator  37.04 
 
 
210 aa  132  3.9999999999999996e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1403  DNA-binding response regulator  37.04 
 
 
210 aa  132  3.9999999999999996e-30  Burkholderia mallei SAVP1  Bacteria  normal  0.846273  n/a   
 
 
-
 
NC_008836  BMA10229_A0473  DNA-binding response regulator  37.04 
 
 
210 aa  132  3.9999999999999996e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1484  DNA-binding response regulator, LuxR family  38.28 
 
 
208 aa  130  1.0000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0289  two component transcriptional regulator, LuxR family  33.8 
 
 
212 aa  130  2.0000000000000002e-29  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_16350  putative two-component response regulator  37.16 
 
 
213 aa  129  5.0000000000000004e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4224  two component LuxR family transcriptional regulator  37.16 
 
 
231 aa  128  8.000000000000001e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.322534  normal  0.434129 
 
 
-
 
NC_009078  BURPS1106A_A0170  capsular synthesis regulator component B  33.8 
 
 
230 aa  128  9.000000000000001e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  0.443347  n/a   
 
 
-
 
NC_007348  Reut_B3619  LuxR response regulator receiver  38.07 
 
 
219 aa  128  9.000000000000001e-29  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1634  DNA-binding response regulator  33.8 
 
 
230 aa  128  9.000000000000001e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  0.723228  n/a   
 
 
-
 
NC_009656  PSPA7_1421  putative two-component response regulator  35.75 
 
 
213 aa  124  9e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4965  two component LuxR family transcriptional regulator  38.5 
 
 
214 aa  124  1e-27  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.122556 
 
 
-
 
NC_012880  Dd703_1041  transcriptional regulator RcsB  34.43 
 
 
218 aa  123  2e-27  Dickeya dadantii Ech703  Bacteria  normal  0.140172  n/a   
 
 
-
 
NC_009832  Spro_3267  transcriptional regulator RcsB  34.45 
 
 
216 aa  122  4e-27  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00059602  normal 
 
 
-
 
NC_012912  Dd1591_3017  transcriptional regulator RcsB  33.96 
 
 
216 aa  122  5e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3209  transcriptional regulator RcsB  34.43 
 
 
216 aa  121  9e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0258  LuxR response regulator receiver  34.26 
 
 
230 aa  121  9e-27  Burkholderia pseudomallei 668  Bacteria  normal  0.752946  n/a   
 
 
-
 
NC_012917  PC1_1107  transcriptional regulator RcsB  34.43 
 
 
216 aa  121  9.999999999999999e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0283  two component transcriptional regulator, LuxR family  36.19 
 
 
208 aa  120  9.999999999999999e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.393471  normal  0.0532877 
 
 
-
 
NC_010515  Bcenmc03_4641  two component LuxR family transcriptional regulator  34.26 
 
 
213 aa  119  4.9999999999999996e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.169112  normal  0.068024 
 
 
-
 
NC_010159  YpAngola_A1307  transcriptional regulator RcsB  33.49 
 
 
217 aa  117  9.999999999999999e-26  Yersinia pestis Angola  Bacteria  normal  0.0162714  normal 
 
 
-
 
NC_010465  YPK_2843  transcriptional regulator RcsB  33.49 
 
 
217 aa  117  9.999999999999999e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1693  LuxR response regulator receiver  35.98 
 
 
214 aa  117  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.478316  n/a   
 
 
-
 
NC_007974  Rmet_3939  two component transcriptional regulator  37.1 
 
 
300 aa  117  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.555587 
 
 
-
 
NC_009708  YpsIP31758_2764  transcriptional regulator RcsB  33.49 
 
 
217 aa  117  9.999999999999999e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.408225  n/a   
 
 
-
 
NC_010515  Bcenmc03_4702  two component LuxR family transcriptional regulator  33.33 
 
 
213 aa  116  1.9999999999999998e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.121015 
 
 
-
 
NC_010515  Bcenmc03_4225  two component LuxR family transcriptional regulator  33.18 
 
 
241 aa  116  3e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.107538  normal  0.322545 
 
 
-
 
NC_007650  BTH_II0198  DNA-binding response regulator  33.18 
 
 
230 aa  116  3e-25  Burkholderia thailandensis E264  Bacteria  normal  0.292201  n/a   
 
 
-
 
CP001637  EcDH1_1441  two component transcriptional regulator, LuxR family  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000259515  n/a   
 
 
-
 
NC_009801  EcE24377A_2517  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000000600529  n/a   
 
 
-
 
NC_010468  EcolC_1433  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Escherichia coli ATCC 8739  Bacteria  normal  0.0102563  hitchhiker  0.00285537 
 
 
-
 
NC_010498  EcSMS35_2366  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000282288  normal 
 
 
-
 
NC_011205  SeD_A2614  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.588596 
 
 
-
 
NC_011353  ECH74115_3357  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000561339  normal 
 
 
-
 
NC_011094  SeSA_A2496  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.424983  normal 
 
 
-
 
NC_011083  SeHA_C2510  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.731723  normal  0.0675268 
 
 
-
 
NC_011149  SeAg_B2406  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  decreased coverage  0.00000000625449  n/a   
 
 
-
 
NC_011080  SNSL254_A2455  transcriptional regulator RcsB  33.49 
 
 
216 aa  115  3.9999999999999997e-25  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0427332  normal  0.0831575 
 
 
-
 
NC_009800  EcHS_A2357  transcriptional regulator RcsB  33.49 
 
 
228 aa  115  6e-25  Escherichia coli HS  Bacteria  hitchhiker  0.00000000398144  n/a   
 
 
-
 
NC_010658  SbBS512_E0721  transcriptional regulator RcsB  33.49 
 
 
228 aa  115  6e-25  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000245188  n/a   
 
 
-
 
NC_009436  Ent638_2797  transcriptional regulator RcsB  33.01 
 
 
216 aa  115  6e-25  Enterobacter sp. 638  Bacteria  hitchhiker  0.000000283918  normal 
 
 
-
 
NC_010552  BamMC406_3287  two component LuxR family transcriptional regulator  35.75 
 
 
223 aa  115  6.9999999999999995e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.404787 
 
 
-
 
NC_007650  BTH_II0142  DNA-binding response regulator  30.81 
 
 
220 aa  111  7.000000000000001e-24  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3388  two-component response regulator transcription regulator protein  34.1 
 
 
215 aa  111  8.000000000000001e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0201761  normal 
 
 
-
 
NC_010002  Daci_3936  two component LuxR family transcriptional regulator  34.76 
 
 
231 aa  110  1.0000000000000001e-23  Delftia acidovorans SPH-1  Bacteria  normal  0.426907  normal  0.200888 
 
 
-
 
NC_009078  BURPS1106A_A0161  LuxR family DNA-binding response regulator  30.95 
 
 
220 aa  109  3e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1630  DNA-binding response regulator  30.95 
 
 
220 aa  109  3e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0322132  n/a   
 
 
-
 
NC_007511  Bcep18194_B2880  two component LuxR family transcriptional regulator  32.52 
 
 
224 aa  109  4.0000000000000004e-23  Burkholderia sp. 383  Bacteria  normal  0.345086  normal 
 
 
-
 
NC_012856  Rpic12D_3273  two component transcriptional regulator, LuxR family  34.27 
 
 
215 aa  108  6e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3938  two component LuxR family transcriptional regulator  33.98 
 
 
218 aa  107  1e-22  Delftia acidovorans SPH-1  Bacteria  normal  0.189042  normal  0.262256 
 
 
-
 
NC_009075  BURPS668_A0187  LuxR response regulator receiver  30.29 
 
 
220 aa  107  2e-22  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3078  response regulator transcription regulator protein  32.41 
 
 
222 aa  106  3e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0498276  normal 
 
 
-
 
NC_008463  PA14_11120  putative response regulator  33.82 
 
 
214 aa  106  3e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3752  two component LuxR family transcriptional regulator  31.67 
 
 
215 aa  106  3e-22  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3041  two component LuxR family transcriptional regulator  33.17 
 
 
215 aa  105  4e-22  Pseudomonas fluorescens Pf0-1  Bacteria  decreased coverage  0.000032992  normal  0.146168 
 
 
-
 
NC_010682  Rpic_3595  two component transcriptional regulator, LuxR family  33.33 
 
 
215 aa  105  7e-22  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4070  two component LuxR family transcriptional regulator  31.94 
 
 
229 aa  103  2e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4069  two component LuxR family transcriptional regulator  32.41 
 
 
225 aa  102  3e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1157  two component LuxR family transcriptional regulator  31.43 
 
 
215 aa  102  3e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.505737  normal 
 
 
-
 
NC_010622  Bphy_0356  two component LuxR family transcriptional regulator  32.85 
 
 
223 aa  102  5e-21  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3357  two component transcriptional regulator, LuxR family  29.82 
 
 
222 aa  102  5e-21  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3081  two component LuxR family transcriptional regulator  32.08 
 
 
217 aa  101  8e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.450994  normal  0.856151 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  26.98 
 
 
213 aa  101  1e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  34.09 
 
 
221 aa  100  1e-20  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0631  two component transcriptional regulator, LuxR family  32.41 
 
 
214 aa  100  2e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.151672 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  30.35 
 
 
213 aa  100  2e-20  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  33.33 
 
 
222 aa  100  2e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_010681  Bphyt_0630  two component transcriptional regulator, LuxR family  31.02 
 
 
234 aa  99.4  4e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.210211 
 
 
-
 
NC_012856  Rpic12D_3010  two component transcriptional regulator, LuxR family  29.36 
 
 
222 aa  99.4  4e-20  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5217  two component LuxR family transcriptional regulator  32.04 
 
 
224 aa  99.4  4e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5152  two component LuxR family transcriptional regulator  32.21 
 
 
219 aa  99.4  4e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.535465  normal 
 
 
-
 
NC_007348  Reut_B3667  two component LuxR family transcriptional regulator  33.18 
 
 
215 aa  99  5e-20  Ralstonia eutropha JMP134  Bacteria  normal  0.849529  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  28.3 
 
 
214 aa  99  6e-20  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_010622  Bphy_0355  two component LuxR family transcriptional regulator  32.13 
 
 
236 aa  99  6e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  29.52 
 
 
209 aa  98.6  7e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal 
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  32.52 
 
 
214 aa  97.4  1e-19  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  31.94 
 
 
219 aa  97.4  1e-19  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0121621 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  30.05 
 
 
215 aa  96.7  2e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  30.58 
 
 
215 aa  96.3  3e-19  Burkholderia phymatum STM815  Bacteria  normal  normal  0.976007 
 
 
-
 
NC_011071  Smal_0735  two component transcriptional regulator, LuxR family  32.23 
 
 
213 aa  96.3  3e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010553  BamMC406_6665  two component LuxR family transcriptional regulator  31.07 
 
 
225 aa  95.9  4e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0397086  normal  0.0268041 
 
 
-
 
NC_007974  Rmet_3986  two component LuxR family transcriptional regulator  30.05 
 
 
217 aa  95.9  4e-19  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.039666 
 
 
-
 
NC_010552  BamMC406_4728  two component LuxR family transcriptional regulator  33.17 
 
 
225 aa  95.5  5e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.825096  normal  0.434564 
 
 
-
 
NC_009656  PSPA7_1021  putative response regulator  33.98 
 
 
214 aa  95.5  5e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_59770  putative two component response regulator  31.31 
 
 
231 aa  95.5  6e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000114482  hitchhiker  1.6476100000000001e-18 
 
 
-
 
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