23 homologs were found in PanDaTox collection
for query gene Bxe_A2653 on replicon NC_007951
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007951  Bxe_A2653  putative type IV secretion system protein VirB5/TraF  100 
 
 
237 aa  479  1e-134  Burkholderia xenovorans LB400  Bacteria  normal  0.0243741  normal 
 
 
-
 
NC_007951  Bxe_A1758  putative type IV secretion system protein VirB5/TraF  88.61 
 
 
231 aa  428  1e-119  Burkholderia xenovorans LB400  Bacteria  normal  0.291545  normal  0.256118 
 
 
-
 
NC_010676  Bphyt_6502  P-type DNA transfer protein VirB5  81.09 
 
 
231 aa  385  1e-106  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0452  putative type IV secretion system protein VirB5/TraF  77.88 
 
 
235 aa  370  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  0.385252  normal 
 
 
-
 
NC_010681  Bphyt_0165  P-type DNA transfer protein VirB5  77.29 
 
 
236 aa  361  6e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.572956 
 
 
-
 
NC_008543  Bcen2424_3317  type IV secretion system family protein  63.84 
 
 
235 aa  306  1.0000000000000001e-82  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4198  P-type DNA transfer protein VirB5  62.07 
 
 
236 aa  306  2.0000000000000002e-82  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.835189 
 
 
-
 
NC_004578  PSPTO_0531  type IV secretion system protein, putative  35.86 
 
 
254 aa  141  8e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0065  type IV secretion system protein VirB5  37.13 
 
 
238 aa  140  1.9999999999999998e-32  Brucella suis 1330  Bacteria  normal  0.0500304  n/a   
 
 
-
 
NC_009504  BOV_A0059  P-type DNA transfer protein VirB5  37.13 
 
 
238 aa  138  7.999999999999999e-32  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010509  Mrad2831_6326  P-type DNA transfer protein VirB5  38.92 
 
 
236 aa  135  8e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_1139  P-type DNA transfer protein VirB5  38.5 
 
 
231 aa  134  9.999999999999999e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0867  type IV secretion system family protein  36.36 
 
 
238 aa  134  9.999999999999999e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010627  Bphy_7533  type IV secretion system family protein  34.63 
 
 
225 aa  98.2  1e-19  Burkholderia phymatum STM815  Bacteria  normal  0.0210387  normal  0.0576761 
 
 
-
 
NC_012792  Vapar_5817  type IV secretion system family protein  28.69 
 
 
244 aa  76.3  0.0000000000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008242  Meso_4345  type IV secretion system  27 
 
 
231 aa  73.2  0.000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0678  P-type DNA transfer protein VirB5  23.36 
 
 
232 aa  64.7  0.000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.511281  n/a   
 
 
-
 
NC_010679  Bphyt_7348  type IV secretion system family protein  31.88 
 
 
234 aa  62  0.000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.260808 
 
 
-
 
NC_009717  Xaut_5085  P-type DNA transfer protein VirB5  25.67 
 
 
231 aa  61.2  0.00000001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.997151 
 
 
-
 
NC_009432  Rsph17025_4375  type IV secretion system family protein  26.03 
 
 
239 aa  51.2  0.00001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.669124 
 
 
-
 
NC_011148  SeAg_A0029  putative conjugal transfer protein  26.05 
 
 
217 aa  49.7  0.00004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  n/a    n/a   
 
 
-
 
NC_009508  Swit_5006  type IV secretion system family protein  24.89 
 
 
238 aa  48.9  0.00007  Sphingomonas wittichii RW1  Bacteria  decreased coverage  0.000746811  normal  0.254693 
 
 
-
 
NC_008771  Veis_5025  type IV secretion system family protein  27.21 
 
 
221 aa  43.9  0.002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0212937  n/a   
 
 
-
 
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