More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_5105 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_5105  acyl-CoA dehydrogenase domain protein  100 
 
 
384 aa  777    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3728  putative acyl-CoA dehydrogenase  65.25 
 
 
381 aa  503  1e-141  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3836  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  66.49 
 
 
388 aa  489  1e-137  Ralstonia eutropha JMP134  Bacteria  normal  0.498534  n/a   
 
 
-
 
NC_007348  Reut_B3534  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  44.38 
 
 
377 aa  302  6.000000000000001e-81  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6833  acyl-CoA dehydrogenase domain-containing protein  43.6 
 
 
386 aa  296  4e-79  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.508275  normal 
 
 
-
 
NC_007778  RPB_1750  Acyl-CoA dehydrogenase-like  42.01 
 
 
380 aa  288  1e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_010511  M446_0232  acyl-CoA dehydrogenase domain-containing protein  46.56 
 
 
382 aa  286  2.9999999999999996e-76  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0506844 
 
 
-
 
NC_011894  Mnod_5440  acyl-CoA dehydrogenase domain protein  46.15 
 
 
382 aa  283  4.0000000000000003e-75  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0415811  n/a   
 
 
-
 
NC_009485  BBta_7070  putative pimeloyl-CoA dehydrogenase pimD (small subunit)  41.19 
 
 
380 aa  281  1e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.562071  normal  0.731705 
 
 
-
 
NC_007958  RPD_3549  acyl-CoA dehydrogenase-like  41.51 
 
 
380 aa  280  3e-74  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4234  pimeloyl-CoA dehydrogenase, small subunit  41.33 
 
 
380 aa  279  5e-74  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6857  acyl-CoA dehydrogenase domain-containing protein  42.82 
 
 
377 aa  276  5e-73  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.728752 
 
 
-
 
NC_010512  Bcenmc03_6852  acyl-CoA dehydrogenase domain-containing protein  44.41 
 
 
384 aa  273  3e-72  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2230  acyl-CoA dehydrogenase-like  42.32 
 
 
380 aa  273  3e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0715641  normal  0.106969 
 
 
-
 
NC_007348  Reut_B4789  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  44.68 
 
 
375 aa  269  5e-71  Ralstonia eutropha JMP134  Bacteria  normal  0.227907  n/a   
 
 
-
 
NC_013440  Hoch_2701  acyl-CoA dehydrogenase domain protein  44.33 
 
 
395 aa  266  2.9999999999999995e-70  Haliangium ochraceum DSM 14365  Bacteria  normal  0.223315  normal  0.557916 
 
 
-
 
NC_008228  Patl_0106  acyl-CoA dehydrogenase-like  40.33 
 
 
379 aa  264  2e-69  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.856093  n/a   
 
 
-
 
NC_010002  Daci_1396  acyl-CoA dehydrogenase domain-containing protein  43.9 
 
 
378 aa  262  6.999999999999999e-69  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0252  acyl-CoA dehydrogenase domain-containing protein  42.55 
 
 
372 aa  261  1e-68  Acidiphilium cryptum JF-5  Bacteria  normal  0.318159  n/a   
 
 
-
 
NC_007509  Bcep18194_C7145  Acyl-CoA dehydrogenase  42.36 
 
 
371 aa  260  3e-68  Burkholderia sp. 383  Bacteria  normal  0.237527  normal 
 
 
-
 
NC_011004  Rpal_1430  acyl-CoA dehydrogenase domain protein  42.39 
 
 
378 aa  252  9.000000000000001e-66  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6882  acyl-CoA dehydrogenase domain-containing protein  42.39 
 
 
380 aa  252  9.000000000000001e-66  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1061  acyl-CoA dehydrogenase domain-containing protein  40.22 
 
 
376 aa  249  7e-65  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1239  Acyl-CoA dehydrogenase-like  41.58 
 
 
378 aa  248  2e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4957  acyl-CoA dehydrogenase domain-containing protein  39.79 
 
 
378 aa  245  8e-64  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2592  acyl-CoA dehydrogenase-like  43.36 
 
 
381 aa  244  1.9999999999999999e-63  Rhodoferax ferrireducens T118  Bacteria  normal  0.144332  n/a   
 
 
-
 
NC_007958  RPD_4006  acyl-CoA dehydrogenase-like  41.58 
 
 
380 aa  243  3.9999999999999997e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.294245  normal  0.950138 
 
 
-
 
NC_010338  Caul_2049  acyl-CoA dehydrogenase domain-containing protein  39.3 
 
 
385 aa  243  3.9999999999999997e-63  Caulobacter sp. K31  Bacteria  normal  0.0167524  normal 
 
 
-
 
NC_012791  Vapar_0841  acyl-CoA dehydrogenase domain protein  42.55 
 
 
380 aa  243  5e-63  Variovorax paradoxus S110  Bacteria  normal  0.0273673  n/a   
 
 
-
 
NC_007974  Rmet_3804  putative acyl-CoA dehydrogenase-like protein  44.54 
 
 
369 aa  243  6e-63  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3736  acyl-CoA dehydrogenase domain-containing protein  41.19 
 
 
376 aa  242  9e-63  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1105  acyl-CoA dehydrogenase-like protein  39.35 
 
 
379 aa  242  9e-63  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.492674  normal 
 
 
-
 
NC_010622  Bphy_1991  acyl-CoA dehydrogenase domain-containing protein  40.27 
 
 
375 aa  241  1e-62  Burkholderia phymatum STM815  Bacteria  normal  0.72938  normal  0.485366 
 
 
-
 
NC_012856  Rpic12D_1873  acyl-CoA dehydrogenase domain protein  40.54 
 
 
376 aa  241  2e-62  Ralstonia pickettii 12D  Bacteria  normal  0.451558  normal  0.28146 
 
 
-
 
NC_007908  Rfer_1645  acyl-CoA dehydrogenase-like  39.36 
 
 
371 aa  238  1e-61  Rhodoferax ferrireducens T118  Bacteria  normal  0.700839  n/a   
 
 
-
 
NC_009511  Swit_1992  acyl-CoA dehydrogenase domain-containing protein  41.53 
 
 
366 aa  237  2e-61  Sphingomonas wittichii RW1  Bacteria  normal  0.128277  normal 
 
 
-
 
NC_007948  Bpro_3846  acyl-CoA dehydrogenase-like  39.63 
 
 
371 aa  237  3e-61  Polaromonas sp. JS666  Bacteria  normal  normal  0.94503 
 
 
-
 
NC_010682  Rpic_2196  acyl-CoA dehydrogenase domain protein  39.73 
 
 
376 aa  236  5.0000000000000005e-61  Ralstonia pickettii 12J  Bacteria  normal  normal  0.341698 
 
 
-
 
NC_010681  Bphyt_2738  acyl-CoA dehydrogenase domain protein  42.28 
 
 
375 aa  236  6e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1239  acyl-CoA dehydrogenase domain-containing protein  41.84 
 
 
379 aa  232  6e-60  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.384683 
 
 
-
 
NC_009511  Swit_0318  acyl-CoA dehydrogenase domain-containing protein  42.35 
 
 
376 aa  232  9e-60  Sphingomonas wittichii RW1  Bacteria  normal  0.318022  normal 
 
 
-
 
NC_008781  Pnap_3225  acyl-CoA dehydrogenase domain-containing protein  39.26 
 
 
371 aa  231  2e-59  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1061  acyl-CoA dehydrogenase domain-containing protein  41.18 
 
 
384 aa  231  2e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3191  putative pimeloyl-CoA dehydrogenase (small subunit), PimD-like  38.81 
 
 
375 aa  230  2e-59  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4312  acyl-CoA dehydrogenase domain-containing protein  42.55 
 
 
377 aa  231  2e-59  Acidovorax citrulli AAC00-1  Bacteria  normal  0.404578  normal  0.454435 
 
 
-
 
NC_010002  Daci_5375  acyl-CoA dehydrogenase domain-containing protein  40.69 
 
 
371 aa  231  2e-59  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.932772 
 
 
-
 
NC_007951  Bxe_A1389  acyl-CoA dehydrogenase  42.01 
 
 
376 aa  230  3e-59  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.322148 
 
 
-
 
NC_008752  Aave_3440  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
371 aa  230  3e-59  Acidovorax citrulli AAC00-1  Bacteria  normal  0.746544  normal  0.0926225 
 
 
-
 
NC_008785  BMASAVP1_A0208  acyl-CoA dehydrogenase domain-containing protein  40.96 
 
 
376 aa  229  4e-59  Burkholderia mallei SAVP1  Bacteria  normal  0.0837363  n/a   
 
 
-
 
NC_011992  Dtpsy_3017  acyl-CoA dehydrogenase domain protein  41.46 
 
 
376 aa  229  4e-59  Acidovorax ebreus TPSY  Bacteria  normal  0.497113  n/a   
 
 
-
 
NC_008836  BMA10229_A1384  acyl-CoA dehydrogenase domain-containing protein  40.96 
 
 
376 aa  229  6e-59  Burkholderia mallei NCTC 10229  Bacteria  normal  0.92204  n/a   
 
 
-
 
NC_006348  BMA3232  acyl-CoA dehydrogenase domain-containing protein  40.96 
 
 
376 aa  229  6e-59  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2811  acyl-CoA dehydrogenase domain-containing protein  40.96 
 
 
376 aa  229  6e-59  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0636  acyl-CoA dehydrogenase domain-containing protein  40.81 
 
 
376 aa  228  1e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0472  acyl-CoA dehydrogenase domain-containing protein  40.69 
 
 
376 aa  228  1e-58  Burkholderia pseudomallei 1106a  Bacteria  normal  0.627616  n/a   
 
 
-
 
NC_012791  Vapar_1273  acyl-CoA dehydrogenase domain protein  37.17 
 
 
371 aa  228  1e-58  Variovorax paradoxus S110  Bacteria  normal  0.592297  n/a   
 
 
-
 
NC_008390  Bamb_2932  acyl-CoA dehydrogenase domain-containing protein  42.4 
 
 
381 aa  227  2e-58  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2732  acyl-CoA dehydrogenase domain protein  40.53 
 
 
371 aa  227  2e-58  Acidovorax ebreus TPSY  Bacteria  normal  0.226148  n/a   
 
 
-
 
NC_009074  BURPS668_0452  acyl-CoA dehydrogenase domain-containing protein  40.54 
 
 
376 aa  227  3e-58  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5148  putative acyl-CoA dehydrogenase, pimD-like protein  40.11 
 
 
376 aa  227  3e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.210774  normal  0.0144786 
 
 
-
 
NC_008782  Ajs_3394  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
371 aa  227  3e-58  Acidovorax sp. JS42  Bacteria  normal  normal  0.396655 
 
 
-
 
NC_010681  Bphyt_1363  acyl-CoA dehydrogenase domain protein  38.27 
 
 
375 aa  227  3e-58  Burkholderia phytofirmans PsJN  Bacteria  normal  0.344203  decreased coverage  0.000723921 
 
 
-
 
NC_007347  Reut_A0979  Acyl-CoA dehydrogenase, C-terminal  37.77 
 
 
372 aa  226  4e-58  Ralstonia eutropha JMP134  Bacteria  normal  0.525022  n/a   
 
 
-
 
NC_007973  Rmet_0945  acyl-CoA dehydrogenase-like protein  37.77 
 
 
372 aa  226  4e-58  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5529  putative acyl-CoA dehydrogenase  39.27 
 
 
379 aa  226  6e-58  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6219  Acyl-CoA dehydrogenase  41.4 
 
 
378 aa  225  9e-58  Burkholderia sp. 383  Bacteria  normal  0.0215478  normal 
 
 
-
 
NC_007348  Reut_B3604  Acyl-CoA dehydrogenase, C-terminal  40.16 
 
 
381 aa  225  1e-57  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1789  acyl-CoA dehydrogenase domain-containing protein  39.52 
 
 
380 aa  225  1e-57  Mycobacterium sp. KMS  Bacteria  normal  0.662681  normal 
 
 
-
 
NC_008146  Mmcs_1742  acyl-CoA dehydrogenase-like protein  39.52 
 
 
380 aa  225  1e-57  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4558  Acyl-CoA dehydrogenase, C-terminal  40.6 
 
 
360 aa  223  4e-57  Ralstonia eutropha JMP134  Bacteria  normal  0.126579  n/a   
 
 
-
 
NC_003295  RSc2044  putative acyl-CoA dehydrogenase oxidoreductase protein  38.99 
 
 
376 aa  222  8e-57  Ralstonia solanacearum GMI1000  Bacteria  normal  0.761176  normal  0.220022 
 
 
-
 
NC_008726  Mvan_1964  acyl-CoA dehydrogenase domain-containing protein  41.11 
 
 
380 aa  221  9.999999999999999e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_008786  Veis_2105  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
371 aa  219  3.9999999999999997e-56  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4380  acyl-CoA dehydrogenase domain-containing protein  40.59 
 
 
380 aa  219  7.999999999999999e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.629178  normal 
 
 
-
 
NC_008347  Mmar10_1653  acyl-CoA dehydrogenase domain-containing protein  37.33 
 
 
379 aa  219  8.999999999999998e-56  Maricaulis maris MCS10  Bacteria  normal  normal  0.257956 
 
 
-
 
NC_006348  BMA1811  acyl-CoA dehydrogenase domain-containing protein  36.15 
 
 
377 aa  216  5e-55  Burkholderia mallei ATCC 23344  Bacteria  normal  0.309229  n/a   
 
 
-
 
NC_008836  BMA10229_A0719  acyl-CoA dehydrogenase domain-containing protein  36.15 
 
 
377 aa  216  5e-55  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1148  acyl-CoA dehydrogenase domain-containing protein  36.15 
 
 
377 aa  216  5e-55  Burkholderia mallei SAVP1  Bacteria  normal  0.260916  n/a   
 
 
-
 
NC_009080  BMA10247_0431  acyl-CoA dehydrogenase domain-containing protein  36.15 
 
 
377 aa  216  5e-55  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0375  acyl-CoA dehydrogenase domain-containing protein  39.2 
 
 
375 aa  215  9e-55  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.507671 
 
 
-
 
NC_010084  Bmul_0426  acyl-CoA dehydrogenase domain-containing protein  40.86 
 
 
378 aa  215  9.999999999999999e-55  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3710  Acyl-CoA dehydrogenase, C-terminal  40.98 
 
 
385 aa  215  9.999999999999999e-55  Ralstonia eutropha JMP134  Bacteria  normal  0.905419  n/a   
 
 
-
 
NC_007434  BURPS1710b_1454  acyl-CoA dehydrogenase domain-containing protein  35.9 
 
 
377 aa  214  9.999999999999999e-55  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1807  acyl-CoA dehydrogenase domain protein  40.43 
 
 
381 aa  214  9.999999999999999e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.239478  n/a   
 
 
-
 
NC_009076  BURPS1106A_1317  acyl-CoA dehydrogenase domain-containing protein  35.9 
 
 
377 aa  214  9.999999999999999e-55  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2255  acyl-CoA dehydrogenase domain-containing protein  38.08 
 
 
377 aa  214  1.9999999999999998e-54  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.94036  normal 
 
 
-
 
NC_009077  Mjls_1723  acyl-CoA dehydrogenase domain-containing protein  39.78 
 
 
380 aa  214  1.9999999999999998e-54  Mycobacterium sp. JLS  Bacteria  normal  0.0930374  normal 
 
 
-
 
NC_009074  BURPS668_1308  acyl-CoA dehydrogenase domain-containing protein  35.64 
 
 
377 aa  213  2.9999999999999995e-54  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3359  acyl-CoA dehydrogenase domain protein  41.84 
 
 
377 aa  212  7e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1079  acyl-CoA dehydrogenase domain-containing protein  35.64 
 
 
377 aa  212  9e-54  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1619  acyl-CoA dehydrogenase-like  38.01 
 
 
377 aa  212  1e-53  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2231  acyl-CoA dehydrogenase domain-containing protein  38.01 
 
 
377 aa  212  1e-53  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0395  acyl-CoA dehydrogenase domain-containing protein  39.19 
 
 
376 aa  211  2e-53  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5559  Acyl-CoA dehydrogenase  37.3 
 
 
377 aa  211  3e-53  Burkholderia sp. 383  Bacteria  normal  normal  0.323338 
 
 
-
 
NC_010551  BamMC406_2794  acyl-CoA dehydrogenase domain-containing protein  41.44 
 
 
381 aa  210  3e-53  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0554549  normal 
 
 
-
 
NC_007974  Rmet_5142  putative acyl-CoA dehydrogenase  39.19 
 
 
392 aa  206  5e-52  Cupriavidus metallidurans CH34  Bacteria  normal  0.609608  normal  0.24821 
 
 
-
 
NC_008390  Bamb_2269  acyl-CoA dehydrogenase domain-containing protein  37.3 
 
 
377 aa  206  7e-52  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1445  acyl-CoA dehydrogenase domain-containing protein  38.07 
 
 
377 aa  204  2e-51  Caulobacter sp. K31  Bacteria  normal  0.837233  normal  0.259915 
 
 
-
 
NC_010084  Bmul_1046  acyl-CoA dehydrogenase domain-containing protein  36.66 
 
 
377 aa  204  2e-51  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0778322  normal  0.0932442 
 
 
-
 
NC_008705  Mkms_5208  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
368 aa  203  5e-51  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>