13 homologs were found in PanDaTox collection
for query gene Bphyt_1183 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010681  Bphyt_1183  hypothetical protein  100 
 
 
632 aa  1275    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6273  hypothetical protein  53.66 
 
 
503 aa  475  1e-133  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0432  hypothetical protein  37.04 
 
 
495 aa  54.7  0.000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.435778  normal 
 
 
-
 
NC_010508  Bcenmc03_2384  hypothetical protein  56.14 
 
 
415 aa  52.8  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.458902  normal  0.697232 
 
 
-
 
NC_013061  Phep_3113  glycoside hydrolase family 28  39.33 
 
 
524 aa  48.1  0.0004  Pedobacter heparinus DSM 2366  Bacteria  unclonable  0.00001805  normal 
 
 
-
 
NC_013061  Phep_2818  glycoside hydrolase family 28  29.63 
 
 
542 aa  47.8  0.0006  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3444  hypothetical protein  35.85 
 
 
622 aa  47  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.623137 
 
 
-
 
NC_013061  Phep_0717  glycoside hydrolase family 28  45.31 
 
 
559 aa  47  0.001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3464  Carbohydrate binding family 6  48.78 
 
 
649 aa  45.4  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.235288  hitchhiker  0.0024319 
 
 
-
 
NC_012669  Bcav_3618  hypothetical protein  33.06 
 
 
547 aa  44.3  0.007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.216975 
 
 
-
 
NC_013730  Slin_4926  hypothetical protein  26.21 
 
 
541 aa  44.3  0.007  Spirosoma linguale DSM 74  Bacteria  normal  0.388677  normal  0.452379 
 
 
-
 
NC_013061  Phep_1710  glycoside hydrolase family 28  40.74 
 
 
518 aa  44.3  0.008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.190203  hitchhiker  0.00186796 
 
 
-
 
NC_010571  Oter_3719  exo-poly-alpha-D-galacturonosidase precursor  48.08 
 
 
537 aa  43.5  0.01  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
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