26 homologs were found in PanDaTox collection
for query gene Bcer98_3860 on replicon NC_009674
Organism: Bacillus cytotoxicus NVH 391-98



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009674  Bcer98_3860  DNA-directed RNA polymerase subunit delta  100 
 
 
169 aa  322  2e-87  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5470  DNA-directed RNA polymerase subunit delta  89.72 
 
 
177 aa  181  3e-45  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5462  DNA-directed RNA polymerase subunit delta  89.72 
 
 
177 aa  181  4.0000000000000006e-45  Bacillus cereus B4264  Bacteria  unclonable  0.0000162912  n/a   
 
 
-
 
NC_011658  BCAH187_A5517  DNA-directed RNA polymerase subunit delta  89.72 
 
 
177 aa  181  4.0000000000000006e-45  Bacillus cereus AH187  Bacteria  normal  0.0210368  n/a   
 
 
-
 
NC_011772  BCG9842_B5490  DNA-directed RNA polymerase subunit delta  86.92 
 
 
177 aa  179  2e-44  Bacillus cereus G9842  Bacteria  hitchhiker  0.00117438  hitchhiker  2.49521e-24 
 
 
-
 
NC_010184  BcerKBAB4_5137  DNA-directed RNA polymerase subunit delta  84.07 
 
 
175 aa  179  2e-44  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5188  DNA-directed RNA polymerase subunit delta  88.07 
 
 
175 aa  178  2.9999999999999997e-44  Bacillus anthracis str. Sterne  Bacteria  normal  0.321779  n/a   
 
 
-
 
NC_005957  BT9727_5023  DNA-directed RNA polymerase subunit delta  88.07 
 
 
176 aa  178  2.9999999999999997e-44  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5432  DNA-directed RNA polymerase subunit delta  88.07 
 
 
176 aa  178  2.9999999999999997e-44  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.60674e-20 
 
 
-
 
NC_006274  BCZK5039  DNA-directed RNA polymerase subunit delta  88.07 
 
 
176 aa  178  2.9999999999999997e-44  Bacillus cereus E33L  Bacteria  normal  0.010623  n/a   
 
 
-
 
NC_007530  GBAA_5584  DNA-directed RNA polymerase subunit delta  88.07 
 
 
175 aa  178  2.9999999999999997e-44  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3338  DNA-directed RNA polymerase delta subunit  55.43 
 
 
186 aa  116  9.999999999999999e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3447  DNA-directed RNA polymerase delta subunit  56.18 
 
 
185 aa  115  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009513  Lreu_0229  DNA-directed RNA polymerase subunit delta  50 
 
 
185 aa  113  1.0000000000000001e-24  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000000904626  n/a   
 
 
-
 
NC_004116  SAG0106  DNA-directed RNA polymerase subunit delta  42.65 
 
 
191 aa  98.2  4e-20  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.000088797  n/a   
 
 
-
 
NC_008530  LGAS_0225  DNA-directed RNA polymerase subunit delta  44.44 
 
 
186 aa  97.1  1e-19  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000284137  hitchhiker  0.00000000000000509139 
 
 
-
 
NC_008531  LEUM_0513  DNA-directed RNA polymerase subunit delta  42.86 
 
 
195 aa  94.4  7e-19  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.0000414403  n/a   
 
 
-
 
NC_008532  STER_0192  DNA-directed RNA polymerase subunit delta  40.15 
 
 
191 aa  90.9  8e-18  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.000000182723  n/a   
 
 
-
 
NC_002976  SERP1735  DNA-directed RNA polymerase subunit delta  43.01 
 
 
178 aa  89  3e-17  Staphylococcus epidermidis RP62A  Bacteria  normal  0.656517  n/a   
 
 
-
 
NC_008527  LACR_0658  DNA-directed RNA polymerase subunit delta  35.71 
 
 
187 aa  85.1  4e-16  Lactococcus lactis subsp. cremoris SK11  Bacteria  unclonable  0.00000882542  n/a   
 
 
-
 
NC_009487  SaurJH9_2164  DNA-directed RNA polymerase subunit delta  39.78 
 
 
176 aa  84.3  8e-16  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2202  DNA-directed RNA polymerase subunit delta  39.78 
 
 
176 aa  84.3  8e-16  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1788  DNA-directed RNA polymerase, delta subunit  40.66 
 
 
195 aa  78.2  0.00000000000004  Oenococcus oeni PSU-1  Bacteria  normal  0.0925991  n/a   
 
 
-
 
NC_013205  Aaci_2786  DNA-directed RNA polymerase delta subunit  38.67 
 
 
177 aa  77.8  0.00000000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.797688  n/a   
 
 
-
 
NC_011830  Dhaf_4845  DNA-directed RNA polymerase delta subunit, putative  32.35 
 
 
145 aa  45.1  0.0004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000454073  n/a   
 
 
-
 
NC_006055  Mfl649  RNA polymerase subunit delta  28.83 
 
 
141 aa  41.2  0.008  Mesoplasma florum L1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>